The University of Queensland

Microfluidics, nanotechnology and disease biomarkers for personalized medicine applications

Muhammad J. A. Shiddiky, Eugene J. H. Wee, Sakandar Rauf and Matt Trau eds. (2013). Microfluidics, nanotechnology and disease biomarkers for personalized medicine applications. New Developments in Medical Research, United States: Nova Science Publishers.

A microfluidic SERS assay to characterize the phenotypic heterogeneity in cancer-derived small extracellular vesicles

Wang, Jing, Trau, Matt and Wuethrich, Alain (2023). A microfluidic SERS assay to characterize the phenotypic heterogeneity in cancer-derived small extracellular vesicles. Microfluidic systems for cancer diagnosis. (pp. 241-253) edited by Jose L. Garcia-Cordero and Alexander Revzin. New York, NY, United States: Humana Press. doi: 10.1007/978-1-0716-3271-0_17

Multiplex PCR design for scalable resequencing

Korbie, Darren and Trau, Matt (2022). Multiplex PCR design for scalable resequencing. PCR Primer Design. (pp. 143-158) edited by Chhandak Basu. New York, NY, United States: Humana Press. doi: 10.1007/978-1-0716-1799-1_11

Simultaneous BRAFV600E protein and DNA aberration detection in circulating melanoma cells using an integrated multimolecular sensor

Wuethrich, Alain, Dey, Shuvashis, Koo, Kevin M, Sina, Abu A. I. and Trau, Matt (2021). Simultaneous BRAFV600E protein and DNA aberration detection in circulating melanoma cells using an integrated multimolecular sensor. Melanoma. (pp. 265-276) New York, NY, United States: Humana Press. doi: 10.1007/978-1-0716-1205-7_20

Nucleic Acid Detection of Tuberculosis Via Innovative Point-of-Care Nanotechnologies Targeted for Low Resource Settings

Ng, Benjamin Y.C., Wee, Eugene J.H., West, Nicholas P. and Trau, Matt (2019). Nucleic Acid Detection of Tuberculosis Via Innovative Point-of-Care Nanotechnologies Targeted for Low Resource Settings. Revolutionizing Tropical Medicine. (pp. 584-599) Hoboken, NJ United States: John Wiley & Sons. doi: 10.1002/9781119282686.ch33

Interfacial biosensing: direct biosensing of biomolecules at the bare metal interface

Ibn Sina, A. A., Koo, K. M., Ahmed, M., Carrascosa, L. G. and Trau, M. (2018). Interfacial biosensing: direct biosensing of biomolecules at the bare metal interface. Encyclopedia of interfacial chemistry: surface science and electrochemistry. (pp. 269-277) Amsterdam: Elsevier. doi: 10.1016/b978-0-12-409547-2.14188-5

Purification protocols for extracellular vesicles

Lane, Rebecca E., Korbie, Darren, Trau, Matt and Hill, Michelle M. (2017). Purification protocols for extracellular vesicles. In Winston Patrick Kuo and Shidong Jia (Ed.), Extracellular vesicles: methods and protocols (pp. 111-130) New York, United States: Humana Press. doi:10.1007/978-1-4939-7253-1_10

Detecting DNA methylation for cancer diagnostics and prognostics

Wee, Eugene J. H., Shiddiky, Muhammad J. A. and Trau, Matt (2013). Detecting DNA methylation for cancer diagnostics and prognostics. Microfluidics, nanotechnology and disease biomarkers for personalized medicine applications. (pp. 117-132) edited by Muhammad J. A. Shiddiky, Eugene J. H. Wee, Sakandar Rauf and Matt Trau. New York, NY, United States: Nova Publishers.

Preface

Shiddiky, Muhammad J.A., Wee, Eugene J.H., Rauf, Sakandar and Trau, Matt (2013). Preface. Microfluidics, nanotechnology and disease biomarkers for personalized medicine applications. edited by Muhammad J. A. Shiddiky, Eugene J. H. Wee, Sakandar Rauf and Matt Trau. Hauppauge, NY, United States: Nova Science Publishers.

Biosensors for disease biomarker detection

Battersby, B. J., Chen, A., Kozak, D. and Trau, M. (2012). Biosensors for disease biomarker detection. Biosensors for medical applications. (pp. 191-216) edited by Seamus Higson. Oxford, United Kingdom: Woodhead Publishing. doi: 10.1016/B978-1-84569-935-2.50007-3

Nanotechnology : the future of cost-effective plant genotyping

Pattemore, J. A., Trau, M. and Henry, R. J. (2008). Nanotechnology : the future of cost-effective plant genotyping. Plant genotyping II : SNP technology. (pp. 133-153) edited by R. J. Henry. Wallingford, United Kingdom: CABI Publishing. doi: 10.1079/9781845933821.0133

Colloids for encoding chemical libraries: Applications in biological screening

Battersby, Bronwyn J., Grondahl, Lisbeth, Lawrie, Gwendolyn A. and Trau, Matt (2004). Colloids for encoding chemical libraries: Applications in biological screening. Colloids and Colloid Assemblies. (pp. 507-560) edited by F. Caruso. Weinheim: Wiley VCH. doi: 10.1002/3527602100.ch17

Cancer‐on‐Chip and Integrative Tumor Microenvironment Sensor Technologies for Progressing Precision Radiotherapy

Dey, Shuvashis, Kinoshita, Masaki, Puttick, Simon, Rose, Stephen, Trau, Matt, Roberts, Matthew J. and Koo, Kevin M. (2024). Cancer‐on‐Chip and Integrative Tumor Microenvironment Sensor Technologies for Progressing Precision Radiotherapy. Advanced Sensor Research. doi: 10.1002/adsr.202300193

High Accuracy of Clinical Verification of Electrohydrodynamic-Driven Nanobox-on-Mirror Platform for Molecular Identification of Respiratory Viruses

Li, Junrong, Guan, Rui, Wuethrich, Alain, Yan, Mingzhe, Cheng, Jing, Liu, Guorong, Zhan, Jianbo, Trau, Matt and Sun, Yao (2024). High Accuracy of Clinical Verification of Electrohydrodynamic-Driven Nanobox-on-Mirror Platform for Molecular Identification of Respiratory Viruses. Analytical Chemistry, 96 (11), 4495-4504. doi: 10.1021/acs.analchem.3c05120

Analysis of secreted small extracellular vesicles from activated human microglial cell lines reveals distinct pro‐ and anti‐inflammatory proteomic profiles

Niu, Xueming, Zhang, Zhen, Zhou, Quan, Wuethrich, Alain, Lobb, Richard and Trau, Matt (2024). Analysis of secreted small extracellular vesicles from activated human microglial cell lines reveals distinct pro‐ and anti‐inflammatory proteomic profiles. PROTEOMICS, e2300094. doi: 10.1002/pmic.202300094

Defining the relationship between cellular and extracellular vesicle (EV) content in breast cancer via an integrative multi‐omic analysis

Lane, Rebecca E., Korbie, Darren, Khanna, Kum Kum, Mohamed, Ahmed, Hill, Michelle M. and Trau, Matt (2024). Defining the relationship between cellular and extracellular vesicle (EV) content in breast cancer via an integrative multi‐omic analysis. PROTEOMICS, e2300089. doi: 10.1002/pmic.202300089

A mesoporous gold biosensor to investigate immune checkpoint protein heterogeneity in single lung cancer cells

Ahmed, Emtiaz, Masud, Mostafa Kamal, Komatineni, Prathyusha, Dey, Shuvashis, Lobb, Richard, Hossain, Md Shahriar A., Möller, Andreas, Yamauchi, Yusuke, Sina, Abu Ali Ibn and Trau, Matt (2024). A mesoporous gold biosensor to investigate immune checkpoint protein heterogeneity in single lung cancer cells. Biosensors and Bioelectronics, 249 115984, 115984. doi: 10.1016/j.bios.2023.115984

Integration of Yeast Episomal/Integrative Plasmid Causes Genotypic and Phenotypic Diversity and Improved Sesquiterpene Production in Metabolically Engineered <i>Saccharomyces cerevisiae</i>

Peng, Bingyin, Weintraub, Sarah J., Lu, Zeyu, Evans, Samuel, Shen, Qianyi, McDonnell, Liam, Plan, Manuel, Collier, Thomas, Cheah, Li Chen, Ji, Lei, Howard, Christopher B., Anderson, Will, Trau, Matt, Dumsday, Geoff, Bredeweg, Erin L., Young, Eric M., Speight, Robert and Vickers, Claudia E. (2023). Integration of Yeast Episomal/Integrative Plasmid Causes Genotypic and Phenotypic Diversity and Improved Sesquiterpene Production in Metabolically Engineered Saccharomyces cerevisiae. ACS Synthetic Biology, 13 (1), 141-156. doi: 10.1021/acssynbio.3c00363

Digital platforms enabling single-molecule analysis for cancer detection

Li, Junrong, Zhang, Zhen, Trau, Matt and Wuethrich, Alain (2023). Digital platforms enabling single-molecule analysis for cancer detection. TrAC Trends in Analytical Chemistry, 171 117502, 117502. doi: 10.1016/j.trac.2023.117502

Tracking the EMT-like phenotype switching during targeted therapy in melanoma by analyzing extracellular vesicle phenotypes

Zhou, Quan, Wang, Jing, Zhang, Zhen, Wuethrich, Alain, Lobb, Richard J. and Trau, Matt (2023). Tracking the EMT-like phenotype switching during targeted therapy in melanoma by analyzing extracellular vesicle phenotypes. Biosensors and Bioelectronics, 244 115819, 115819. doi: 10.1016/j.bios.2023.115819

Multiplex SERS-Lectin-Immunoassay for Esophageal Adenocarcinoma Screening

Khamis, Ramlah, Shanmugasundaram, Karthik B, Zhou, Quan, Lu, Jennifer, Zhang, Zhen, Hill, Michelle M., Sina, Abu Ali Ibn, Trau, Matt and Wuethrich, Alain (2023). Multiplex SERS-Lectin-Immunoassay for Esophageal Adenocarcinoma Screening. ACS Applied Nano Materials, 6 (21), 20190-20197. doi: 10.1021/acsanm.3c03987

Profiling proteomics responses to hexokinase-II depletion in terpene-producing Saccharomyces cerevisiae

Lu, Zeyu, Shen, Qianyi, Liu, Lian, Talbo, Gert, Speight, Robert, Trau, Matt, Dumsday, Geoff, Howard, Christopher B., Vickers, Claudia E. and Peng, Bingyin (2023). Profiling proteomics responses to hexokinase-II depletion in terpene-producing Saccharomyces cerevisiae. Engineering Microbiology, 3 (3) 100079, 100079. doi: 10.1016/j.engmic.2023.100079

A microfluidic liquid biopsy platform to monitor protein biomarker heterogeneity in single circulating therapy‐resistance cancer cell

Ahmed, Emtiaz, Shanmugasundaram, Karthik Balaji, Li, Junrong, Behren, Andreas, Lobb, Richard, Möller, Andreas, Wuethrich, Alain, Dey, Shuvashis, Sina, Abu Ali Ibn and Trau, Matt (2023). A microfluidic liquid biopsy platform to monitor protein biomarker heterogeneity in single circulating therapy‐resistance cancer cell. Advanced Sensor Research, 2 (12). doi: 10.1002/adsr.202300059

A universal reagent for detection of emerging diseases using bioengineered multifunctional yeast nanofragments

Li, Junrong, Howard, Christopher B., Dey, Shuvashis, Lowry, Kym, Whiley, David M., Puttick, Simon, Rose, Stephen, Lobb, Richard J., Wuethrich, Alain, Edwardraja, Selvakumar and Trau, Matt (2023). A universal reagent for detection of emerging diseases using bioengineered multifunctional yeast nanofragments. Nature Nanotechnology, 18 (10), 1222-1229. doi: 10.1038/s41565-023-01415-1

Plasma extracellular vesicle phenotyping for the differentiation of early-stage lung cancer and benign lung disease

Yuan, Liwen, Chen, Yanping, Ke, Longfeng, Zhou, Quan, Chen, Jiayou, Fan, Min, Wuethrich, Alain, Trau, Matt and Wang, Jing (2023). Plasma extracellular vesicle phenotyping for the differentiation of early-stage lung cancer and benign lung disease. Nanoscale Horizons, 8 (6), 746-758. doi: 10.1039/d2nh00570k

Liquid biopsy snapshots of key phosphoproteomic pathways in lung cancer patients for diagnosis and therapy monitoring

Ahmed, Mostak, Wuethrich, Alain, Constantin, Nicolas, Shanmugasundaram, Karthik Balaji, Mainwaring, Paul, Kulasinghe, Arutha, O’Leary, Connor, O’Byrne, Ken, Sina, Abu Ali Ibn, Carrascosa, Laura G. and Trau, Matt (2023). Liquid biopsy snapshots of key phosphoproteomic pathways in lung cancer patients for diagnosis and therapy monitoring. Analytical Chemistry, 95 (22), 8522-8532. doi: 10.1021/acs.analchem.3c00519

A translational project of the WSG-ADAPT-TN trial demonstrates immunomodulatory and anti-viral defense gene networks predicting pathological complete response (pCR) and survival after de-escalated neoadjuvant chemotherapy (NACT) in early triple-negative breast cancer (eTNBC)

Graeser, M., Harbeck, N., Gluz, O., Nitz, U.A., Christgen, M., Kuemmel, S., Grischke, E-M., Forstbauer, H., Braun, M., Warm, M., Hackmann, J.C., Uleer, C., Aktas, B., Würstlein, R., Pelz, E., Eulenburg, C. Zu, Kreipe, H., Trau, M., Stirzaker, C. and Korbie, D. (2023). A translational project of the WSG-ADAPT-TN trial demonstrates immunomodulatory and anti-viral defense gene networks predicting pathological complete response (pCR) and survival after de-escalated neoadjuvant chemotherapy (NACT) in early triple-negative breast cancer (eTNBC). ESMO Open, 8 (1) 101242, 10-11. doi: 10.1016/j.esmoop.2023.101242

A multiplexed SERS microassay for accurate detection of SARS-CoV-2 and variants of concern

Vedelago, Courtney, Li, Junrong, Lowry, Kym, Howard, Christopher, Wuethrich, Alain and Trau, Matt (2023). A multiplexed SERS microassay for accurate detection of SARS-CoV-2 and variants of concern. ACS Sensors, 8 (4), 1648-1657. doi: 10.1021/acssensors.2c02782

Digital decoding of single extracellular vesicle phenotype differentiates early malignant and benign lung lesions

Li, Junrong, Sina, Abu A. I., Antaw, Fiach, Fielding, David, Möller, Andreas, Lobb, Richard, Wuethrich, Alain and Trau, Matt (2023). Digital decoding of single extracellular vesicle phenotype differentiates early malignant and benign lung lesions. Advanced Science, 10 (1) 2204207, e2204207. doi: 10.1002/advs.202204207

Nanophotonic immunoarray with electrochemically roughened surfaces for handheld detection of secreted PD-L1 to predict immuno-oncology efficacy

Dey, Shuvashis, Koo, Kevin M., Ahmed, Emtiaz and Trau, Matt (2023). Nanophotonic immunoarray with electrochemically roughened surfaces for handheld detection of secreted PD-L1 to predict immuno-oncology efficacy. Lab on a Chip, 23 (15), 3443-3452. doi: 10.1039/d3lc00523b

Tetraplex immunophenotyping of cell surface proteomes via synthesized plasmonic nanotags and portable raman spectroscopy

Wang, Jing, Koo, Kevin M. and Trau, Matt (2022). Tetraplex immunophenotyping of cell surface proteomes via synthesized plasmonic nanotags and portable raman spectroscopy. Analytical Chemistry, 94 (43), 14906-14916. doi: 10.1021/acs.analchem.2c02262

SERS multiplex profiling of melanoma circulating tumor cells for predicting the response to immune checkpoint blockade therapy

Li, Junrong, Wuethrich, Alain, Zhang, Zhen, Wang, Jing, Lin, Lynlee L., Behren, Andreas, Wang, Yuling and Trau, Matt (2022). SERS multiplex profiling of melanoma circulating tumor cells for predicting the response to immune checkpoint blockade therapy. Analytical Chemistry, 94 (42), 14573-14582. doi: 10.1021/acs.analchem.2c02398

Detection of Dengue Virus 2 with single infected mosquito resolution using yeast affinity bionanofragments and plasmonic SERS nanoboxes

Farokhinejad, Fahimeh, Li, Junrong, Hugo, Leon E., Howard, Christopher B., Wuethrich, Alain and Trau, Matt (2022). Detection of Dengue Virus 2 with single infected mosquito resolution using yeast affinity bionanofragments and plasmonic SERS nanoboxes. Analytical Chemistry, 94 (41), 14177-14184. doi: 10.1021/acs.analchem.2c02012

Modelling clinical DNA fragmentation in the development of universal PCR-based assays for bisulfite-converted, formalin-fixed and cell-free DNA sample analysis

Johnston, Andrew D., Lu, Jennifer, Korbie, Darren and Trau, Matt (2022). Modelling clinical DNA fragmentation in the development of universal PCR-based assays for bisulfite-converted, formalin-fixed and cell-free DNA sample analysis. Scientific Reports, 12 (1) 16051, 1-18. doi: 10.1038/s41598-022-18196-7

An in vivo gene amplification system for high level expression in Saccharomyces cerevisiae

Peng, Bingyin, Esquirol, Lygie, Lu, Zeyu, Shen, Qianyi, Cheah, Li Chen, Howard, Christopher B., Scott, Colin, Trau, Matt, Dumsday, Geoff and Vickers, Claudia E. (2022). An in vivo gene amplification system for high level expression in Saccharomyces cerevisiae. Nature Communications, 13 (1) 2895, 2895. doi: 10.1038/s41467-022-30529-8

A T‐junction dual nanopore for single nanoparticle analysis

Liao, Caizhi, Antaw, Fiach, Wuethrich, Alain and Trau, Matt (2022). A T‐junction dual nanopore for single nanoparticle analysis. Advanced Engineering Materials, 24 (4) 2101015, 2101015. doi: 10.1002/adem.202101015

C5b-9 membrane attack complex formation and extracellular vesicle shedding in Barrett’s esophagus and esophageal adenocarcinoma

Kolka, Cathryn M., Webster, Julie, Lepletier, Ailin, Winterford, Clay, Brown, Ian, Richards, Renee S., Zelek, Wioleta M., Cao, Yilang, Khamis, Ramlah, Shanmugasundaram, Karthik B., Wuethrich, Alain, Trau, Matt, Brosda, Sandra, Barbour, Andrew, Shah, Alok K., Eslick, Guy D., Clemons, Nicholas J., Morgan, B. Paul and Hill, Michelle M. (2022). C5b-9 membrane attack complex formation and extracellular vesicle shedding in Barrett’s esophagus and esophageal adenocarcinoma. Frontiers in Immunology, 13 842023. doi: 10.3389/fimmu.2022.842023

Next-Generation Molecular Discovery: From Bottom-Up In Vivo and In Vitro Approaches to In Silico Top-Down Approaches for Therapeutics Neogenesis

Kenny, Sophie E., Antaw, Fiach, Locke, Warwick J., Howard, Christopher B., Korbie, Darren and Trau, Matt (2022). Next-Generation Molecular Discovery: From Bottom-Up In Vivo and In Vitro Approaches to In Silico Top-Down Approaches for Therapeutics Neogenesis. Life, 12 (3) 363, 1-24. doi: 10.3390/life12030363

An electrochemical and raman scattering dual detection biosensor for rapid screening and biomolecular profiling of cancer biomarkers

Dey, Shuvashis, Ahmed, Emtiaz, Somvanshi, Pranjal Satishchandra, Sina, Abu Ali Ibn, Wuethrich, Alain and Trau, Matt (2022). An electrochemical and raman scattering dual detection biosensor for rapid screening and biomolecular profiling of cancer biomarkers. Chemosensors, 10 (3) 93. doi: 10.3390/chemosensors10030093

Engineering eukaryote-like regulatory circuits to expand artificial control mechanisms for metabolic engineering in Saccharomyces cerevisiae

Peng, Bingyin, Bandari, Naga Chandra, Lu, Zeyu, Howard, Christopher B., Scott, Colin, Trau, Matt, Dumsday, Geoff and Vickers, Claudia E. (2022). Engineering eukaryote-like regulatory circuits to expand artificial control mechanisms for metabolic engineering in Saccharomyces cerevisiae. Communications Biology, 5 (1) 135, 135. doi: 10.1038/s42003-022-03070-z

Opportunities for early cancer detection: the rise of ctDNA methylation-based pan-cancer screening technologies

Constantin, Nicolas, Sina, Abu Ali Ibn, Korbie, Darren and Trau, Matt (2022). Opportunities for early cancer detection: the rise of ctDNA methylation-based pan-cancer screening technologies. Epigenomes, 6 (1) 6. doi: 10.3390/epigenomes6010006

Toward precision oncology: SERS microfluidic systems for multiplex biomarker analysis in liquid biopsy

Shanmugasundaram, Karthik Balaji, Li, Junrong, Sina, Abu Ibn, Wuethrich, Alain and Trau, Matt (2022). Toward precision oncology: SERS microfluidic systems for multiplex biomarker analysis in liquid biopsy. Materials Advances, 3 (3), 1459-1471. doi: 10.1039/d1ma00848j

Molecular locker probe enrichment of gene fusion variants from matched patient liquid biopsy specimens for magneto-bioelectrocatalytic nanosensing

Koo, Kevin M. and Trau, Matt (2022). Molecular locker probe enrichment of gene fusion variants from matched patient liquid biopsy specimens for magneto-bioelectrocatalytic nanosensing. Nanoscale, 14 (11), 4225-4233. doi: 10.1039/d1nr07845c

Dynamic monitoring of EMT in CTCs as an indicator of cancer metastasis

Zhang, Zhen, Wuethrich, Alain, Wang, Jing, Korbie, Darren, Lin, Lynlee L. and Trau, Matt (2021). Dynamic monitoring of EMT in CTCs as an indicator of cancer metastasis. Analytical Chemistry, 93 (50) acs.analchem.1c03167, 16787-16795. doi: 10.1021/acs.analchem.1c03167

Progressing antimicrobial resistance sensing technologies across human, animal, and environmental health domains

Fitzpatrick, Kira J., Rohlf, Hayden J., Sutherland, Tara D., Koo, Kevin M., Beckett, Sam, Okelo, Walter O., Keyburn, Anthony L., Morgan, Branwen S., Drigo, Barbara, Trau, Matt, Donner, Erica, Djordjevic, Steven P. and De Barro, Paul J. (2021). Progressing antimicrobial resistance sensing technologies across human, animal, and environmental health domains. ACS Sensors, 6 (12) acssensors.1c01973, 4283-4296. doi: 10.1021/acssensors.1c01973

Generation of nanoyeast single-chain variable fragments as high-avidity biomaterials for dengue virus detection

Farokhinejad, Fahimeh, Lane, Rebecca E., Lobb, Richard J., Edwardraja, Selvakumar, Wuethrich, Alain, Howard, Christopher B. and Trau, Matt (2021). Generation of nanoyeast single-chain variable fragments as high-avidity biomaterials for dengue virus detection. ACS Biomaterials Science and Engineering, 7 (12) acsbiomaterials.1c01001, 5850-5860. doi: 10.1021/acsbiomaterials.1c01001

An integrated microfluidic‐SERS platform enables sensitive phenotyping of serum extracellular vesicles in early stage melanomas

Wang, Jing, Kao, Yung‐Ching, Zhou, Quan, Wuethrich, Alain, Stark, Mitchell S., Schaider, Helmut, Soyer, H. Peter, Lin, Lynlee L. and Trau, Matt (2021). An integrated microfluidic‐SERS platform enables sensitive phenotyping of serum extracellular vesicles in early stage melanomas. Advanced Functional Materials, 32 (3) 2010296, 1-9. doi: 10.1002/adfm.202010296

Amplification-free SARS-CoV-2 detection using nanoyeast-scFv and ultrasensitive plasmonic nanobox-integrated nanomixing microassay

Li, Junrong, Wuethrich, Alain, Edwardraja, Selvakumar, Lobb, Richard J., Puttick, Simon, Rose, Stephen, Howard, Christopher B. and Trau, Matt (2021). Amplification-free SARS-CoV-2 detection using nanoyeast-scFv and ultrasensitive plasmonic nanobox-integrated nanomixing microassay. Analytical Chemistry, 93 (29) acs.analchem.1c01657, 10251-10260. doi: 10.1021/acs.analchem.1c01657

Characterizing the heterogeneity of small extracellular vesicle populations in multiple cancer types via an ultrasensitive chip

Wang, Jing, Wuethrich, Alain, Lobb, Richard J., Antaw, Fiach, Sina, Abu Ali Ibn, Lane, Rebecca E., Zhou, Quan, Zieschank, Chloe, Bell, Caroline, Bonazzi, Vanessa F., Aoude, Lauren G., Everitt, Sarah, Yeo, Belinda, Barbour, Andrew P., Möller, Andreas and Trau, Matt (2021). Characterizing the heterogeneity of small extracellular vesicle populations in multiple cancer types via an ultrasensitive chip. ACS Sensors, 6 (9) acssensors.1c00358, 3182-3194. doi: 10.1021/acssensors.1c00358

In situ single cell proteomics reveals circulating tumor cell heterogeneity during treatment

Reza, K. Kamil, Dey, Shuvashis, Wuethrich, Alain, Wang, Jing, Behren, Andreas, Antaw, Fiach, Wang, Yuling, Sina, Abu Ali Ibn and Trau, Matt (2021). In situ single cell proteomics reveals circulating tumor cell heterogeneity during treatment. ACS Nano, 15 (7) acsnano.0c10008, 11231-11243. doi: 10.1021/acsnano.0c10008

Development of EndoScreen chip, a microfluidic pre-endoscopy triage test for esophageal adenocarcinoma

Webster, Julie A., Wuethrich, Alain, Shanmugasundaram, Karthik B., Richards, Renee S., Zelek, Wioleta M., Shah, Alok K., Gordon, Louisa G., Kendall, Bradley J., Hartel, Gunter, Morgan, B. Paul, Trau, Matt and Hill, Michelle M. (2021). Development of EndoScreen chip, a microfluidic pre-endoscopy triage test for esophageal adenocarcinoma. Cancers, 13 (12) 2865, 2865. doi: 10.3390/cancers13122865

On the behavior of nanoparticles beyond the nanopore interface

Antaw, Fiach, Anderson, Will, Wuethrich, Alain and Trau, Matt (2021). On the behavior of nanoparticles beyond the nanopore interface. Langmuir, 37 (16), 4772-4782. doi: 10.1021/acs.langmuir.0c03083

A digital single-molecule nanopillar SERS platform for predicting and monitoring immune toxicities in immunotherapy

Li, Junrong, Wuethrich, Alain, Sina, Abu A. I., Cheng, Han-Hao, Wang, Yuling, Behren, Andreas, Mainwaring, Paul N. and Trau, Matt (2021). A digital single-molecule nanopillar SERS platform for predicting and monitoring immune toxicities in immunotherapy. Nature Communications, 12 (1) 1087, 1-12. doi: 10.1038/s41467-021-21431-w

Network mapping of primary CD34+ cells by Ampliseq based whole transcriptome targeted resequencing identifies unexplored differentiation regulatory relationships

Schwaber, Jessica L., Korbie, Darren, Andersen, Stacey, Lin, Erica, Chrysanthopoulos, Panagiotis K., Trau, Matt and Nielsen, Lars K. (2021). Network mapping of primary CD34+ cells by Ampliseq based whole transcriptome targeted resequencing identifies unexplored differentiation regulatory relationships. PLoS ONE, 16 (2 ) e0246107, e0246107. doi: 10.1371/journal.pone.0246107

Nucleic acid hybridization-based noise suppression for ultraselective multiplexed amplification of mutant variants

Zeng, Yi, Koo, Kevin M., Shen, Ai-Guo, Hu, Ji-Ming and Trau, Matt (2021). Nucleic acid hybridization-based noise suppression for ultraselective multiplexed amplification of mutant variants. Small, 17 (2) 2006370, e2006370. doi: 10.1002/smll.202006370

Nanostructured mesoporous gold biosensor for microRNA detection at attomolar level

Masud, Mostafa Kamal, Na, Jongbeom, Lin, Tzu-En, Malgras, Victor, Preet, Anant, Ibn Sina, Abu Ali, Wood, Kathleen, Billah, Mutasim, Kim, Jeonghun, You, Jungmok, Kani, Kenya, Whitten, Andrew E., Salomon, Carlos, Nguyen, Nam-Trung, Shiddiky, Muhammad J.A., Trau, Matt, Hossain, MdShahriar A. and Yamauchi, Yusuke (2020). Nanostructured mesoporous gold biosensor for microRNA detection at attomolar level. Biosensors and Bioelectronics, 168 112429, 1-9. doi: 10.1016/j.bios.2020.112429

Regulation of canonical oncogenic signaling pathways in cancer via DNA methylation

Lu, Jennifer, Wilfred, Premila, Korbie, Darren and Trau, Matt (2020). Regulation of canonical oncogenic signaling pathways in cancer via DNA methylation. Cancers, 12 (11) 3199, 1-29. doi: 10.3390/cancers12113199

Stacked dual‐pore architecture for deciphering and manipulating dynamics of individual nanoparticles

Liao, Caizhi, Antaw, Fiach, Wuethrich, Alain and Trau, Matt (2020). Stacked dual‐pore architecture for deciphering and manipulating dynamics of individual nanoparticles. Advanced Materials Technologies, 5 (11) 2000701, 2000701. doi: 10.1002/admt.202000701

Direct enhanced detection of multiple circulating tumor dna variants in unprocessed plasma by magnetic-assisted bioelectrocatalytic cycling

Koo, Kevin M. and Trau, Matt (2020). Direct enhanced detection of multiple circulating tumor dna variants in unprocessed plasma by magnetic-assisted bioelectrocatalytic cycling. ACS Sensors, 5 (10), 3217-3225. doi: 10.1021/acssensors.0c01512

Configurable miniaturized 3D pores for robust single‐nanoparticle analysis

Liao, Caizhi, Antaw, Fiach, Wuethrich, Alain, Anderson, Will and Trau, Matt (2020). Configurable miniaturized 3D pores for robust single‐nanoparticle analysis. Small Structures, 1 (2) 2000011. doi: 10.1002/sstr.202000011

Multiomics: The Growing Impact of Micro/Nanomaterial‐Based Systems in Precision Oncology: Translating “Multiomics” Technologies (Adv. Funct. Mater. 37/2020)

Li, Junrong, Wuethrich, Alain, Dey, Shuvashi, Lane, Rebecca E., Sina, Abu A. I., Wang, Jing, Wang, Yuling, Puttick, Simon, Koo, Kevin M. and Trau, Matt (2020). Multiomics: The Growing Impact of Micro/Nanomaterial‐Based Systems in Precision Oncology: Translating “Multiomics” Technologies (Adv. Funct. Mater. 37/2020). Advanced Functional Materials, 30 (37) 2070248. doi: 10.1002/adfm.202070248

Nanostructured mesoporous gold electrodes detect protein phosphorylation in cancer with electrochemical signal amplification

Sina, Abu Ali Ibn, Ahmed, Emtiaz, Masud, Mostafa Kamal, Hossain, Md. Shahriar A., Na, Jongbeom, Yamauchi, Yusuke and Trau, Matt (2020). Nanostructured mesoporous gold electrodes detect protein phosphorylation in cancer with electrochemical signal amplification. Analyst, 145 (20), 6639-6648. doi: 10.1039/d0an01096k

Comprehensive evaluation of targeted multiplex bisulphite PCR sequencing for validation of DNA methylation biomarker panels

Lam, Dilys, Luu, Phuc-Loi, Luu, Phuc-Loi, Song, Jenny Z., Qu, Wenjia, Risbridger, Gail P., Risbridger, Gail P., Risbridger, Gail P., Lawrence, Mitchell G., Lawrence, Mitchell G., Lawrence, Mitchell G., Lu, Jennifer, Trau, Matt, Korbie, Darren, Clark, Susan J., Clark, Susan J., Pidsley, Ruth, Pidsley, Ruth, Stirzaker, Clare and Stirzaker, Clare (2020). Comprehensive evaluation of targeted multiplex bisulphite PCR sequencing for validation of DNA methylation biomarker panels. Clinical Epigenetics, 12 (1) 90, 90. doi: 10.1186/s13148-020-00880-y

Surface-enhanced Raman spectroscopy for cancer immunotherapy applications: opportunities, challenges, and current progress in nanomaterial strategies

Dey, Shuvashis, Trau, Matt and Koo, Kevin M. (2020). Surface-enhanced Raman spectroscopy for cancer immunotherapy applications: opportunities, challenges, and current progress in nanomaterial strategies. Nanomaterials, 10 (6) 1145, 1-15. doi: 10.3390/nano10061145

Methylation dependent gold adsorption behaviour identifies cancer derived extracellular vesicular DNA

Sina, Abu Ali Ibn, Lin, Ting-Yun, Vaidyanathan, Ramanathan, Wang, Zhaoran, Dey, Shuvashis, Wang, Jing, Behren, Andreas, Wuethrich, Alain, Carrascosa, Laura G. and Trau, Matt (2020). Methylation dependent gold adsorption behaviour identifies cancer derived extracellular vesicular DNA. Nanoscale Horizons, 5 (9), 1317-1323. doi: 10.1039/d0nh00258e

A material odyssey for 3D nano/microstructures: two photon polymerization based nanolithography in bioapplications

Liao, Caizhi, Wuethrich, Alain and Trau, Matt (2020). A material odyssey for 3D nano/microstructures: two photon polymerization based nanolithography in bioapplications. Applied Materials Today, 19 100635, 100635. doi: 10.1016/j.apmt.2020.100635

Tracking drug-induced epithelial–mesenchymal transition in breast cancer by a microfluidic surface-enhanced raman spectroscopy immunoassay

Zhang, Zhen, Wang, Jing, Shanmugasundaram, Karthik Balaji, Yeo, Belinda, Möller, Andreas, Wuethrich, Alain, Lin, Lynlee L. and Trau, Matt (2020). Tracking drug-induced epithelial–mesenchymal transition in breast cancer by a microfluidic surface-enhanced raman spectroscopy immunoassay. Small, 16 (13) 1905614, e1905614. doi: 10.1002/smll.201905614

Tracking extracellular vesicle phenotypic changes enables treatment monitoring in melanoma

Wang, Jing, Wuethrich, Alain, Sina, Abu Ali Ibn, Lane, Rebecca E., Lin, Lynlee L., Wang, Yuling, Cebon, Jonathan, Behren, Andreas and Trau, Matt (2020). Tracking extracellular vesicle phenotypic changes enables treatment monitoring in melanoma. Science Advances, 6 (9) eaax3223, eaax3223. doi: 10.1126/sciadv.aax3223

The growing impact of micro/nanomaterial-based systems in precision oncology: translating “multiomics” technologies

Li, Junrong, Wuethrich, Alain, Dey, Shuvashi, Lane, Rebecca E., Sina, Abu A. I., Wang, Jing, Wang, Yuling, Puttick, Simon, Koo, Kevin M. and Trau, Matt (2020). The growing impact of micro/nanomaterial-based systems in precision oncology: translating “multiomics” technologies. Advanced Functional Materials, 30 (37) 1909306, 1909306. doi: 10.1002/adfm.201909306

Ultrasensitive melanoma biomarker detection using a microchip SERS immunoassay with anisotropic Au–Ag alloy nanoboxes

Kumar, Aswin Raj, Shanmugasundaram, Karthik Balaji, Li, Junrong, Zhang, Zhen, Ibn Sina, Abu Ali, Wuethrich, Alain and Trau, Matt (2020). Ultrasensitive melanoma biomarker detection using a microchip SERS immunoassay with anisotropic Au–Ag alloy nanoboxes. RSC Advances, 10 (48), 28778-28785. doi: 10.1039/d0ra05032f

Single droplet detection of immune checkpoints on a multiplexed electrohydrodynamic biosensor

Wuethrich, Alain, Rajkumar, Aswin Raj, Shanmugasundaram, Karthik Balaji, Reza, Kamil K., Dey, Shuvashis, Howard, Christopher B., Sina, Abu Ali Ibn and Trau, Matt (2019). Single droplet detection of immune checkpoints on a multiplexed electrohydrodynamic biosensor. The Analyst, 144 (23), 6914-6921. doi: 10.1039/c9an01450k

Native MicroRNA targets trigger self‐assembly of nanozyme‐patterned hollowed nanocuboids with optimal interparticle gaps for plasmonic‐activated cancer detection

Li, Junrong, Koo, Kevin M., Wang, Yuling and Trau, Matt (2019). Native MicroRNA targets trigger self‐assembly of nanozyme‐patterned hollowed nanocuboids with optimal interparticle gaps for plasmonic‐activated cancer detection. Small, 15 (50) 1904689, 1904689. doi: 10.1002/smll.201904689

Retooling phage display with electrohydrodynamic nanomixing and nanopore sequencing

Raftery, Lyndon J., Howard, Christopher B., Grewal, Yadveer S., Vaidyanathan, Ramanathan, Jones, Martina L., Anderson, Will, Korbie, Darren, Duarte, Tania, Duc Cao, Minh, Nguyen, Son Hoang, Coin, Lachlan JM, Mahler, Stephen M and Trau, Matt (2019). Retooling phage display with electrohydrodynamic nanomixing and nanopore sequencing. Lab on a Chip, 19 (24), 4083-4092. doi: 10.1039/c9lc00978g

Engineering state-of-the-art plasmonic nanomaterials for SERS-based clinical liquid biopsy applications

Wang, Jing, Koo, Kevin M., Wang, Yuling and Trau, Matt (2019). Engineering state-of-the-art plasmonic nanomaterials for SERS-based clinical liquid biopsy applications. Advanced Science, 6 (23) 1900730, 1900730. doi: 10.1002/advs.201900730

Toward personalized cancer treatment: from diagnostics to therapy monitoring in miniaturized electrohydrodynamic systems

Khondakar, Kamil Reza, Dey, Shuvashis, Wuethrich, Alain, Sina, Abu Ali Ibn and Trau, Matt (2019). Toward personalized cancer treatment: from diagnostics to therapy monitoring in miniaturized electrohydrodynamic systems. Accounts of Chemical Research, 52 (8) acs.accounts.9b00192, 2113-2123. doi: 10.1021/acs.accounts.9b00192

DNA methylation-based point-of-care cancer detection: challenges and possibilities

Sina, Abu Ali Ibn, Carrascosa, Laura G. and Trau, Matt (2019). DNA methylation-based point-of-care cancer detection: challenges and possibilities. Trends in Molecular Medicine, 25 (11), 955-966. doi: 10.1016/j.molmed.2019.05.014

Watching SERS glow for multiplex biomolecular analysis in the clinic: A review

Zeng, Yi, Koo, Kevin M., Trau, Matt, Shen, Ai-Guo and Hu, Ji-Ming (2019). Watching SERS glow for multiplex biomolecular analysis in the clinic: A review. Applied Materials Today, 15, 431-444. doi: 10.1016/j.apmt.2019.03.005

Merging new-age biomarkers and nanodiagnostics for precision prostate cancer management

Koo, Kevin M., Mainwaring, Paul N., Tomlins, Scott A. and Trau, Matt (2019). Merging new-age biomarkers and nanodiagnostics for precision prostate cancer management. Nature Reviews Urology, 16 (5), 302-317. doi: 10.1038/s41585-019-0178-2

A microfluidic-SERSplatform for isolation and immuno-phenotyping of antigen specific T-cells

Dey, Shuvashis, Vaidyanathan, Ramanathan, Reza, K. Kamil, Wang, Jing, Wang, Yuling, Nel, Hendrik J., Law, Soi-Cheng, Tyler, Jennifer, Rossjohn, Jamie, Reid, Hugh H., Ibn Sina, Abu Ali, Thomas, Ranjeny and Trau, Matt (2019). A microfluidic-SERSplatform for isolation and immuno-phenotyping of antigen specific T-cells. Sensors and Actuators B: Chemical, 284, 281-288. doi: 10.1016/j.snb.2018.12.099

Optimizing size exclusion chromatography for extracellular vesicle enrichment and proteomic analysis from clinically relevant samples

Lane, Rebecca E., Korbie, Darren, Trau, Matt and Hill, Michelle M. (2019). Optimizing size exclusion chromatography for extracellular vesicle enrichment and proteomic analysis from clinically relevant samples. Proteomics, 19 (8) 1800156, 1800156. doi: 10.1002/pmic.201800156

Reading conformational changes in proteins with a new colloidal-based interfacial biosensing system

Ahmed, Mostak, Carrascosa, Laura G., Mainwaring, Paul and Trau, Matt (2019). Reading conformational changes in proteins with a new colloidal-based interfacial biosensing system. ACS Applied Materials and Interfaces, 11 (12) acsami.8b18269, 11125-11135. doi: 10.1021/acsami.8b18269

A high-resolution study of in situ surface-enhanced Raman scattering nanotag behavior in biological systems

Wang, Jing, Anderson, Will, Li, Junrong, Lin, Lynlee L., Wang, Yuling and Trau, Matt (2019). A high-resolution study of in situ surface-enhanced Raman scattering nanotag behavior in biological systems. Journal of Colloid and Interface Science, 537, 536-546. doi: 10.1016/j.jcis.2018.11.035

PrimerROC: accurate condition-independent dimer prediction using ROC analysis

Johnston, Andrew D., Lu, Jennifer, Ru, Ke-lin, Korbie, Darren and Trau, Matt (2019). PrimerROC: accurate condition-independent dimer prediction using ROC analysis. Scientific Reports, 9 (1) 209, 209. doi: 10.1038/s41598-018-36612-9

Two-photon nanolithography of tailored hollow three-dimensional microdevices for biosystems

Liao, Caizhi, Anderson, Will, Antaw, Fiach and Trau, Matt (2019). Two-photon nanolithography of tailored hollow three-dimensional microdevices for biosystems. ACS Omega, 4 (1), 1401-1409. doi: 10.1021/acsomega.8b03164

Label-free detection of exosomes using surface plasmon resonance biosensor

Sina, A.A.I., Vaidyanathan, R., Wuethrich, A., Carrascosa, L. G. and Trau, M. (2019). Label-free detection of exosomes using surface plasmon resonance biosensor. Analytical and Bioanalytical Chemistry, 411 (7), 1311-1318. doi: 10.1007/s00216-019-01608-5

Phosphoprotein biosensors for monitoring pathological protein structural changes

Ahmed, Mostak, Koo, Kevin M., Mainwaring, Paul N., Carrascosa, Laura G. and Trau, Matt (2019). Phosphoprotein biosensors for monitoring pathological protein structural changes. Trends in Biotechnology, 38 (5), 519-531. doi: 10.1016/j.tibtech.2019.11.006

Tracking antigen specific T-cells: technological advancement and limitations

Dey, Shuvashis, Kamil Reza, K., Wuethrich, Alain, Korbie, Darren, Ibn Sina, Abu Ali and Trau, Matt (2019). Tracking antigen specific T-cells: technological advancement and limitations. Biotechnology Advances, 37 (1), 145-153. doi: 10.1016/j.biotechadv.2018.11.010

An integrated multi-molecular sensor for simultaneous BRAFV600E protein and DNA single point mutation detection in circulating tumour cells

Dey, Shuvashis, Koo, Kevin, Wang, Zhaoran, Sina, Abu Ali Ibn, Wuethrich, Alain and Trau, Matt (2018). An integrated multi-molecular sensor for simultaneous BRAFV600E protein and DNA single point mutation detection in circulating tumour cells. Lab on a Chip, 19 (5), 738-748. doi: 10.1039/c8lc00991k

A sample-to-targeted gene analysis biochip for nanofluidic manipulation of solid-phase circulating tumor nucleic acid amplification in liquid biopsies

Koo, Kevin M., Dey, Shuvashis and Trau, Matt (2018). A sample-to-targeted gene analysis biochip for nanofluidic manipulation of solid-phase circulating tumor nucleic acid amplification in liquid biopsies. ACS Sensors, 3 (12) acssensors.8b01011, 2597-2603. doi: 10.1021/acssensors.8b01011

Epigenetically reprogrammed methylation landscape drives the DNA self-assembly and serves as a universal cancer biomarker

Sina, Abu Ali Ibn, Carrascosa, Laura G., Liang, Ziyu, Grewal, Yadveer S., Wardiana, Andri, Shiddiky, Muhammad J. A., Gardiner, Robert A., Samaratunga, Hemamali, Gandhi, Maher K., Scott, Rodney J., Korbie, Darren and Trau, Matt (2018). Epigenetically reprogrammed methylation landscape drives the DNA self-assembly and serves as a universal cancer biomarker. Nature Communications, 9 (1) 4915, 4915. doi: 10.1038/s41467-018-07214-w

A SERS microfluidic platform for targeting multiple soluble immune checkpoints

Reza, K. Kamil, Sina, Abu Ali Ibn, Wuethrich, Alain, Grewal, Yadveer S., Howard, Christopher B., Korbie, Darren and Trau, Matt (2018). A SERS microfluidic platform for targeting multiple soluble immune checkpoints. Biosensors and Bioelectronics, 126, 178-186. doi: 10.1016/j.bios.2018.10.044

"Mix-to-go" silver colloidal strategy for prostate cancer molecular profiling and risk prediction

Wang, Jing, Koo, Kevin M., Wang, Yuling and Trau, Matt (2018). "Mix-to-go" silver colloidal strategy for prostate cancer molecular profiling and risk prediction. Analytical Chemistry, 90 (21), 12698-12705. doi: 10.1021/acs.analchem.8b02959

Facile one-pot synthesis of nanodot-decorated gold-silver alloy nanoboxes for single-particle surface-enhanced raman scattering activity

Li, Junrong, Zhang, Guannan, Wang, Jing, Maksymov, Ivan S., Greentree, Andrew D., Hu, Jiming, Shen, Aiguo, Wang, Yuling and Trau, Matt (2018). Facile one-pot synthesis of nanodot-decorated gold-silver alloy nanoboxes for single-particle surface-enhanced raman scattering activity. ACS Applied Materials and Interfaces, 10 (38), 32526-32535. doi: 10.1021/acsami.8b10112

Parallel profiling of cancer cells and proteins using a graphene oxide functionalized ac-EHD SERS immunoassay

Reza, K. Kamil, Dey, Shuvashis, Wuethrich, Alain, Sina, Abu Ali Ibn, Korbie, Darren, Wang, Yuling and Trau, Matt (2018). Parallel profiling of cancer cells and proteins using a graphene oxide functionalized ac-EHD SERS immunoassay. Nanoscale, 10 (39), 18482-18491. doi: 10.1039/c8nr02886a

Multiplexed SERS detection of soluble cancer protein biomarkers with gold-silver alloy nanoboxes and nanoyeast single-chain variable fragments

Li, Junrong, Wang, Jing, Grewal, Yadveer S, Howard, Christopher B, Raftery, Lyndon J, Mahler, Stephen, Wang, Yuling and Trau, Matt (2018). Multiplexed SERS detection of soluble cancer protein biomarkers with gold-silver alloy nanoboxes and nanoyeast single-chain variable fragments. Analytical Chemistry, 90 (17) acs.analchem.8b02216, 10377-10384. doi: 10.1021/acs.analchem.8b02216

Design and clinical verification of surface-enhanced Raman spectroscopy diagnostic technology for individual cancer risk prediction

Koo, Kevin M., Wang, Jing, Richards, Renée S., Farrell, Aine, Yaxley, John W., Samaratunga, Hema, Teloken, Patrick E., Roberts, Matthew J., Coughlin, Geoffrey D., Lavin, Martin F., Mainwaring, Paul N., Wang, Yuling, Gardiner, Robert A. and Trau, Matt (2018). Design and clinical verification of surface-enhanced Raman spectroscopy diagnostic technology for individual cancer risk prediction. ACS Nano, 12 (8), 8362-8371. doi: 10.1021/acsnano.8b03698

An exosomal- and interfacial-biosensing based strategy for remote monitoring of aberrantly phosphorylated proteins in lung cancer cells

Ahmed, Mostak, Carrascosa, Laura G, Wuethrich, Alain, Mainwaring, Paul and Trau, Matt (2018). An exosomal- and interfacial-biosensing based strategy for remote monitoring of aberrantly phosphorylated proteins in lung cancer cells. Biomaterials Science, 6 (9), 2336-2341. doi: 10.1039/c8bm00629f

Extracellular vesicles as circulating cancer biomarkers: opportunities and challenges

Lane, R. E., Korbie, D., Hill, M. M. and Trau, M. (2018). Extracellular vesicles as circulating cancer biomarkers: opportunities and challenges. Clinical and Translational Medicine, 7 (1) 14, 14. doi: 10.1186/s40169-018-0192-7

Amplification-free multi-RNA-type profiling for cancer risk stratification via alternating current electrohydrodynamic nanomixing

Koo, Kevin M., Dey, Shuvashis and Trau, Matt (2018). Amplification-free multi-RNA-type profiling for cancer risk stratification via alternating current electrohydrodynamic nanomixing. Small, 14 (17) 1704025, e1704025. doi: 10.1002/smll.201704025

Characterising the phenotypic evolution of circulating tumour cells during treatment

Tsao, Simon Chang-Hao, Wang, Jing, Wang, Yuling, Behren, Andreas, Cebon, Jonathan and Trau, Matt (2018). Characterising the phenotypic evolution of circulating tumour cells during treatment. Nature Communications, 9 (1) 1482, 1482. doi: 10.1038/s41467-018-03725-8

Adjustable fluidic nanomixing: amplification-free multi-RNA-type profiling for cancer risk stratification via alternating current electrohydrodynamic nanomixing (Small 17/2018)

Koo, Kevin M., Dey, Shuvashis and Trau, Matt (2018). Adjustable fluidic nanomixing: amplification-free multi-RNA-type profiling for cancer risk stratification via alternating current electrohydrodynamic nanomixing (Small 17/2018). Small, 14 (17) 1870075. doi: 10.1002/smll.201870075

Interfacial nano-mixing in a miniaturised platform enables signal enhancement and in situ detection of cancer biomarkers

Wuethrich, Alain, Sina, Abu Ali Ibn, Ahmed, Mostak, Lin, Ting-Yun, Carrascosa, Laura G. and Trau, Matt (2018). Interfacial nano-mixing in a miniaturised platform enables signal enhancement and in situ detection of cancer biomarkers. Nanoscale, 10 (23), 10884-10890. doi: 10.1039/C7NR09496E

Maskless 3D Ablation of Precise Microhole Structures in Plastics Using Femtosecond Laser Pulses

Liao, Caizhi, Anderson, Will, Antaw, Fiach and Trau, Matt (2018). Maskless 3D Ablation of Precise Microhole Structures in Plastics Using Femtosecond Laser Pulses. ACS applied materials & interfaces, 10 (4), 4315-4323. doi: 10.1021/acsami.7b18029

Nucleic acid purification from plants, animals and microbes in under 30 seconds

Zou, Yiping, Mason, Michael Glenn, Wang, Yuling, Wee, Eugene, Turni, Conny, Blackall, Patrick J., Trau, Matt and Botella, Jose Ramon (2017). Nucleic acid purification from plants, animals and microbes in under 30 seconds. PLoS Biology, 15 (11) e2003916, e2003916. doi: 10.1371/journal.pbio.2003916

Simple and rapid colorimetric detection of melanoma circulating tumor cells using bifunctional magnetic nanoparticles

Li, Junrong, Wang, Jing, Wang, Yuling and Trau, Matt (2017). Simple and rapid colorimetric detection of melanoma circulating tumor cells using bifunctional magnetic nanoparticles. The Analyst, 142 (24), 4788-4793. doi: 10.1039/c7an01102d

Geometric optimisation of electrohydrodynamic fluid flows for enhanced biosensing

Wuethrich, Alain, Howard, Christopher B. and Trau, Matt (2017). Geometric optimisation of electrohydrodynamic fluid flows for enhanced biosensing. Microchemical Journal, 137, 231-237. doi: 10.1016/j.microc.2017.10.012

Isothermal point mutation detection: toward a first-pass screening strategy for multidrug-resistant tuberculosis

Ng, Benjamin Y. C., Wee, Eugene J. H., Woods, Kyra, Anderson, Will, Antaw, Fiach, Tsang, Hennes Z. H., West, Nicholas P. and Trau, Matt (2017). Isothermal point mutation detection: toward a first-pass screening strategy for multidrug-resistant tuberculosis. Analytical Chemistry, 89 (17), 9017-9022. doi: 10.1021/acs.analchem.7b01685

A multiplex microplatform for the detection of multiple DNA methylation events using gold-DNA affinity

Ibn Sina, Abu Ali, Foster, Matthew Thomas, Korbie, Darren, Carrascosa, Laura G., Shiddiky, Muhammad J. A., Gao, Jing, Dey, Shuvashis and Trau, Matt (2017). A multiplex microplatform for the detection of multiple DNA methylation events using gold-DNA affinity. Analyst, 142 (19), 3573-3578. doi: 10.1039/c7an00611j

Enabling miniaturised personalised diagnostics: from lab-on-a-chip to lab-in-a-drop

Koo, Kevin M., Wee, Eugene J. H., Wang, Yuling and Trau, Matt (2017). Enabling miniaturised personalised diagnostics: from lab-on-a-chip to lab-in-a-drop. Lab On a Chip, 17 (19), 3200-3220. doi: 10.1039/c7lc00587c

PARTICLE triplexes cluster in the tumor suppressor WWOX and may extend throughout the human genome

O'Leary, Valerie Bríd , Smida, Jan, Buske, Fabian Andreas, Carrascosa, Laura Garcia, Azimzadeh, Omid, Maugg, Doris, Hain, Sarah, Tapio, Soile, Heidenreich, Wolfgang, Kerr, James, Trau, Matt, Ovsepian, Saak Victor and Atkinson, Michael John (2017). PARTICLE triplexes cluster in the tumor suppressor WWOX and may extend throughout the human genome. Scientific Reports, 7 (1) 7163, 7163. doi: 10.1038/s41598-017-07295-5

DNA-directed assembly of copper nanoblocks with inbuilt fluorescent and electrochemical properties: Application in simultaneous amplification-free analysis of multiple RNA species

Koo, Kevin M. , Carrascosa, Laura G. and Trau, Matt (2017). DNA-directed assembly of copper nanoblocks with inbuilt fluorescent and electrochemical properties: Application in simultaneous amplification-free analysis of multiple RNA species. Nano Research, 11 (2), 1-13. doi: 10.1007/s12274-017-1706-0

Detection of aberrant protein phosphorylation in cancer using direct gold-protein affinity interactions

Ahmed, Mostak, Carrascosa, Laura G., Ibn Sina, Abu Ali, Zarate, Ester Marina, Korbie, Darren, Ru, Ke-lin, Shiddiky, Muhammad J. A., Mainwaring, Paul and Trau, Matt (2017). Detection of aberrant protein phosphorylation in cancer using direct gold-protein affinity interactions. Biosensors and Bioelectronics, 91, 8-14. doi: 10.1016/j.bios.2016.12.012

Evaluation of different oligonucleotide base substitutions at CpG binding sites in multiplex bisulfite-PCR sequencing

Lu, Jennifer, Ru, Kelin, Candiloro, Ida, Dobrovic, Alexander, Korbie, Darren and Trau, Matt (2017). Evaluation of different oligonucleotide base substitutions at CpG binding sites in multiplex bisulfite-PCR sequencing. Scientific Reports, 7 (1) 45096, 45096. doi: 10.1038/srep45096

High-speed biosensing strategy for non-invasive profiling of multiple cancer fusion genes in urine

Koo, Kevin M., Wee, Eugene J. H. and Trau, Matt (2017). High-speed biosensing strategy for non-invasive profiling of multiple cancer fusion genes in urine. Biosensors and Bioelectronics, 89 (2), 715-720. doi: 10.1016/j.bios.2016.11.024

Electrohydrodynamic-induced SERS immunoassay for extensive multiplexed biomarker sensing

Reza, Khondakar Kamil, Wang, Jing, Vaidyanathan, Ramanathan, Dey, Shuvashis, Wang, Yuling and Trau, Matt (2017). Electrohydrodynamic-induced SERS immunoassay for extensive multiplexed biomarker sensing. Small, 13 (9) 1602902. doi: 10.1002/smll.201602902

A nanoplasmonic label-free surface-enhanced Raman scattering strategy for non-invasive cancer genetic subtyping in patient samples

Wang, Jing, Koo, Kevin M., Wee, Eugene J. H., Wang, Yuling and Trau, Matt (2017). A nanoplasmonic label-free surface-enhanced Raman scattering strategy for non-invasive cancer genetic subtyping in patient samples. Nanoscale, 9 (10), 3496-3503. doi: 10.1039/c6nr09928a

PrimerSuite: a high-throughput web-based primer design program for multiplex bisulfite PCR

Lu, Jennifer, Johnston, Andrew, Berichon, Philippe, Ru, Ke-lin, Korbie, Darren and Trau, Matt (2017). PrimerSuite: a high-throughput web-based primer design program for multiplex bisulfite PCR. Scientific Reports, 7 (1) 41328, 41328. doi: 10.1038/srep41328

Specific and sensitive isothermal electrochemical biosensor for plant pathogen DNA detection with colloidal gold nanoparticles as probes

Lau, Han Yih, Wu, Haoqi, Wee, Eugene J. H., Trau, Matt, Wang, Yuling and Botella, Jose R. (2017). Specific and sensitive isothermal electrochemical biosensor for plant pathogen DNA detection with colloidal gold nanoparticles as probes. Scientific Reports, 7 (1) 38896, 38896. doi: 10.1038/srep38896

Comprehensive evaluation of molecular enhancers of the isothermal exponential amplification reaction

Mok, Ellie, Wee, Eugene, Wang, Yuling and Trau, Matt (2016). Comprehensive evaluation of molecular enhancers of the isothermal exponential amplification reaction. Scientific Reports, 6 (1) 37837, 37837. doi: 10.1038/srep37837

Nanoyeast and other cell envelope compositions for protein studies and biosensor applications

Grewal, Yadveer S., Shiddiky, Muhammad J. A., Mahler, Stephen M., Cangelosi, Gerard A. and Trau, Matt (2016). Nanoyeast and other cell envelope compositions for protein studies and biosensor applications. ACS Applied Materials and Interfaces, 8 (45), 30649-30664. doi: 10.1021/acsami.6b09263

A DNA circuit for IsomiR detection

Connolly, Ashley R., Hirani, Rena, Ellis, Amanda V. and Trau, Matt (2016). A DNA circuit for IsomiR detection. ChemBioChem, 17 (22), 2172-2178. doi: 10.1002/cbic.201600452

Rapid and sensitive fusion gene detection in prostate cancer urinary specimens by label-free surface-enhanced raman scattering

Koo, Kevin M., McNamara, Benjamin, Wee, Eugene J. H., Wang, Yuling and Trau, Matt (2016). Rapid and sensitive fusion gene detection in prostate cancer urinary specimens by label-free surface-enhanced raman scattering. Journal of Biomedical Nanotechnology, 12 (9), 1798-1805. doi: 10.1166/jbn.2016.2294

Field demonstration of a multiplexed point-of-care diagnostic platform for plant pathogens

Lau, Han Yih, Wang, Yuling, Wee, Eugene J. H., Botella, Jose R. and Trau, Matt (2016). Field demonstration of a multiplexed point-of-care diagnostic platform for plant pathogens. Analytical Chemistry, 88 (16), 8074-8081. doi: 10.1021/acs.analchem.6b01551

A simple, rapid, low-cost technique for naked-eye detection of urine-isolated TMPRSS2:ERG gene fusion RNA

Koo, Kevin M., Wee, Eugene J. H., Mainwaring, Paul N. and Trau, Matt (2016). A simple, rapid, low-cost technique for naked-eye detection of urine-isolated TMPRSS2:ERG gene fusion RNA. Scientific reports, 6 (1) 30722, 30722. doi: 10.1038/srep30722

Real time and label free profiling of clinically relevant exosomes

Sina, Abu Ali Ibn, Vaidyanathan, Ramanathan, Dey, Shuvashis, Carrascosa, Laura G., Shiddiky, Muhammad J. A. and Trau, Matt (2016). Real time and label free profiling of clinically relevant exosomes. Scientific Reports, 6 (30460) 30460, 1-9. doi: 10.1038/srep30460

Rapid molecular profiling of myeloproliferative neoplasms using targeted Exon Resequencing of 86 genes involved in JAK-STAT signaling and epigenetic regulation

Magor, Graham W., Tallack, Michael R., Klose, Nathan M., Taylor, Debra, Korbie, Darren, Mollee, Peter, Trau, Matt and Perkins, Andrew C. (2016). Rapid molecular profiling of myeloproliferative neoplasms using targeted Exon Resequencing of 86 genes involved in JAK-STAT signaling and epigenetic regulation. Journal of Molecular Diagnostics, 18 (5), 707-718. doi: 10.1016/j.jmoldx.2016.05.006

Amplification-free detection of gene fusions in prostate cancer urinary samples using mRNA-gold affinity interactions

Koo, Kevin M., Carrascosa, Laura G., Shiddiky, Muhammad J. A. and Trau, Matt (2016). Amplification-free detection of gene fusions in prostate cancer urinary samples using mRNA-gold affinity interactions. Analytical Chemistry, 88 (13), 6781-6788. doi: 10.1021/acs.analchem.6b01182

Simple, sensitive and accurate multiplex detection of clinically important melanoma DNA mutations in circulating tumour DNA With SERS nanotags

Wee, Eugene J. H., Wang, Yuling, Simon, Chang-Hao Tsao and Trau, Matt (2016). Simple, sensitive and accurate multiplex detection of clinically important melanoma DNA mutations in circulating tumour DNA With SERS nanotags. Theranostics, 6 (10), 1506-1513. doi: 10.7150/thno.15871

Colorimetric TMPRSS2-ERG gene fusion detection in prostate cancer urinary samples via recombinase polymerase amplification

Koo, Kevin, Wee, Eugene and Trau, Matt (2016). Colorimetric TMPRSS2-ERG gene fusion detection in prostate cancer urinary samples via recombinase polymerase amplification. Theranostics, 6 (9), 1415-1424. doi: 10.7150/thno.15250

Phase II randomized preoperative window-of-opportunity study of the PI3K inhibitor pictilisib plus anastrozole compared with anastrozole alone in patients with estrogen receptor-positive breast cancer

Schmid, Peter, Pinder, Sarah E., Wheatley, Duncan, Macaskill, Jane, Zammit, Charles, Hu, Jennifer, Price, Robert, Bundred, Nigel, Hadad, Sirwan, Shia, Alice, Sarker, Shah-Jalal, Lim, Louise, Gazinska, Patrycja, Woodman, Natalie, Korbie, Darren, Trau, Matt, Mainwaring, Paul, Gendreau, Steven, Lackner, Mark R., Derynck, Mika, Wilson, Timothy R., Butler, Hannah, Earl, Gemma, Parker, Peter, Purushotham, Arnie and Thompson, Alastair (2016). Phase II randomized preoperative window-of-opportunity study of the PI3K inhibitor pictilisib plus anastrozole compared with anastrozole alone in patients with estrogen receptor-positive breast cancer. Journal of Clinical Oncology, 34 (17), 1987-1994. doi: 10.1200/JCO.2015.63.9179

Biosensing made easy with PEG-targeted bi-specific antibodies

Raftery, Lyndon J., Grewal, Yadveer S., Howard, Christopher B., Jones, Martina L., Shiddiky, Muhammad J. A., Carrascosa, Laura G., Thurecht, Kristofer J., Mahler, Stephen M. and Trau, Matt (2016). Biosensing made easy with PEG-targeted bi-specific antibodies. Chemical Communications, 52 (33), 5730-5733. doi: 10.1039/C6CC01916A

Electric field induced isolation, release, and recapture of tumor cells

Dey, Shuvashis, Vaidyanathan, Ramanathan, Carrascosa, Laura G., Shiddiky, Muhammad J. A. and Trau, Matt (2016). Electric field induced isolation, release, and recapture of tumor cells. ACS Sensors, 1 (4), 399-405. doi: 10.1021/acssensors.5b00157

Simple isothermal strategy for multiplexed, rapid, sensitive, and accurate miRNA detection

Wee, Eugene J. H. and Trau, Matt (2016). Simple isothermal strategy for multiplexed, rapid, sensitive, and accurate miRNA detection. ACS Sensors, 1 (6), 670-675. doi: 10.1021/acssensors.6b00105

Electrochemical detection of protein glycosylation using lectin and protein-gold affinity interactions

Yadav, Sharda, Carrascosa, Laura G., Sina, Abu A. I., Shiddiky, Muhammad J. A., Hill, Michelle M. and Trau, Matt (2016). Electrochemical detection of protein glycosylation using lectin and protein-gold affinity interactions. Analyst, 141 (8), 2356-2361. doi: 10.1039/c6an00528d

MethPat: a tool for the analysis and visualisation of complex methylation patterns obtained by massively parallel sequencing

Wong, Nicholas C., Pope, Bernard J., Candiloro, Ida L., Korbie, Darren, Trau, Matt, Wong, Stephen Q., Mikeska, Thomas, Zhang, Xinmin Z, Pitman, Mark, Eggers, Stefanie, Doyle, Stephen R and Dobrovic, Alexander (2016). MethPat: a tool for the analysis and visualisation of complex methylation patterns obtained by massively parallel sequencing. BMC Bioinformatics, 17 (1) 98, 98.1-98.14. doi: 10.1186/s12859-016-0950-8

Capture and on-chip analysis of melanoma cells using tunable surface shear forces

Tsao, Simon Chang-Hao, Vaidyanathan, Ramanathan, Dey, Shuvashis, Carrascosa, Laura G., Christophi, Christopher, Cebon, Jonathan, Shiddiky, Muhammad J. A., Behren, Andreas and Trau, Matt (2016). Capture and on-chip analysis of melanoma cells using tunable surface shear forces. Scientific Reports, 6 (1) 19709, 19709.1-19709.10. doi: 10.1038/srep19709

Poly(A) extensions of miRNAs for amplification-free electrochemical detection on screen-printed gold electrodes

Koo, Kevin M., Carrascosa, Laura G., Shiddiky, Muhammad J. A. and Trau, Matt (2016). Poly(A) extensions of miRNAs for amplification-free electrochemical detection on screen-printed gold electrodes. Analytical Chemistry, 88 (4), 2000-2005. doi: 10.1021/acs.analchem.5b04795

Accurate and sensitive total genomic DNA methylation analysis from sub-nanogram input with embedded SERS nanotags

Wang, Yuling, Wee, Eugene J. H. and Trau, Matt (2016). Accurate and sensitive total genomic DNA methylation analysis from sub-nanogram input with embedded SERS nanotags. Chemical Communications, 52 (17), 3560-3563. doi: 10.1039/C6CC00547K

Toward precision medicine: a cancer molecular subtyping nano-trategy for RNA biomarkers in tumor and urine

Koo, Kevin M., Wee, Eugene J. H., Mainwaring, Paul N., Wang, Yuling and Trau, Matt (2016). Toward precision medicine: a cancer molecular subtyping nano-trategy for RNA biomarkers in tumor and urine. Small, 12 (45), 6233-6242. doi: 10.1002/smll.201602161

Naked-eye colorimetric and electrochemical detection of Mycobacterium tuberculosis—toward rapid screening for active case finding

Ng, Benjamin Y. C., Wee, Eugene J. H., West, Nicholas P. and Trau, Matt (2015). Naked-eye colorimetric and electrochemical detection of Mycobacterium tuberculosis—toward rapid screening for active case finding. ACS Sensors, 1 (2), 173-178. doi: 10.1021/acssensors.5b00171

Exemplary multiplex bisulfite amplicon data used to demonstrate the utility of Methpat

Wong, Nicholas C., Pope, Bernard J., Candiloro, Ida, Korbie, Darren, Trau, Matt, Wong, Stephen Q., Mikeska, Thomas, van Denderen, Bryce J. W., Thompson, Erik W., Eggers, Stefanie, Doyle, Stephen R. and Dobrovic, Alexander (2015). Exemplary multiplex bisulfite amplicon data used to demonstrate the utility of Methpat. Gigascience, 4 (1) 55, 55.1-55.8. doi: 10.1186/s13742-015-0098-x

Enhancing protein capture using a combination of nanoyeast single-chain fragment affinity reagents and alternating current electrohydrodynamic forces

Vaidyanathan, Ramanathan, Rauf, Sakandar, Grewal, Yadveer S., Spadafora, Lauren J., Shiddiky, Muhammad J. A., Cangelosi, Gerard A. and Trau, Matt (2015). Enhancing protein capture using a combination of nanoyeast single-chain fragment affinity reagents and alternating current electrohydrodynamic forces. Analytical Chemistry, 87 (23), 11673-11681. doi: 10.1021/acs.analchem.5b02490

Alternating current electrohydrodynamics in microsystems: Pushing biomolecules and cells around on surfaces

Vaidyanathan, Ramanathan, Dey, Shuvashis, Carrascosa, Laura G., Shiddiky, Muhammad J.A. and Trau, Matt (2015). Alternating current electrohydrodynamics in microsystems: Pushing biomolecules and cells around on surfaces. Biomicrofluidics, 9 (061501) 061501, 061501. doi: 10.1063/1.4936300

Rapid, Single-Cell Electrochemical Detection of Mycobacterium tuberculosis Using Colloidal Gold Nanoparticles

Ng, Benjamin Y. C., Xiao, Wei, West, Nicholas P., Wee, Eugene J. H., Wang, Yuling and Trau, Matt (2015). Rapid, Single-Cell Electrochemical Detection of Mycobacterium tuberculosis Using Colloidal Gold Nanoparticles. Analytical Chemistry, 87 (20), 10613-10618. doi: 10.1021/acs.analchem.5b03121

A simple bridging flocculation assay for rapid, sensitive and stringent detection of gene specific DNA methylation

Wee, Eugene J. H., Ngo, Thu Ha and Trau, Matt (2015). A simple bridging flocculation assay for rapid, sensitive and stringent detection of gene specific DNA methylation. Scientific Reports, 5 (Art No.: 15028) 15028, 15028. doi: 10.1038/srep15028

Rapid DNA detection of Mycobacterium tuberculosis-towards single cell sensitivity in point-of-care diagnosis

Ng, Benjamin Y.C., Wee, Eugene J. H., West, Nicholas P. and Trau, Matt (2015). Rapid DNA detection of Mycobacterium tuberculosis-towards single cell sensitivity in point-of-care diagnosis. Scientific Reports, 5 (1) 15027, 15027.1-15027.7. doi: 10.1038/srep15027

DNA methylation of oestrogen-regulated enhancers defines endocrine sensitivity in breast cancer

Stone, Andrew, Zotenko, Elena, Locke, Warwick J., Korbie, Darren, Millar, Ewan K. A., Pidsley, Ruth, Stirzaker, Clare, Graham, Peter, Trau, Matt, Musgrove, Elizabeth A., Nicholson, Robert I., Gee, Julia M. W. and Clark, Susan J. (2015). DNA methylation of oestrogen-regulated enhancers defines endocrine sensitivity in breast cancer. Nature Communications, 6 (1) 7758, 7758.1-7758.9. doi: 10.1038/ncomms8758

Colorimetric detection of both total genomic and loci-specific DNA methylation from limited DNA inputs

Wee, Eugene J. H., Ngo, Thu Ha and Trau, Matt (2015). Colorimetric detection of both total genomic and loci-specific DNA methylation from limited DNA inputs. Clinical Epigenetics, 7 (1) 65, 65. doi: 10.1186/s13148-015-0100-6

DNA-bare gold affinity interactions: mechanism and applications in biosensing

Koo, Kevin M., Sina, Abu A. I., Carrascosa, Laura G., Shiddiky, Muhammad J. A. and Trau, Matt (2015). DNA-bare gold affinity interactions: mechanism and applications in biosensing. Analytical Methods, 7 (17), 1-13. doi: 10.1039/c5ay01479d

Enabling rapid and specific surface enhanced raman scattering immunoassay using nano-scaled surface shear forces

Wang, Yuling, Vaidyanathan, Ramanathan, Shiddiky, Muhammad J. A. and Trau, Matt (2015). Enabling rapid and specific surface enhanced raman scattering immunoassay using nano-scaled surface shear forces. ACS Nano, 9 (6), 6354-6362. doi: 10.1021/acsnano.5b01929

Observations of tunable resistive pulse sensing for exosome analysis: improving system sensitivity and stability

Anderson, Will, Lane, Rebecca, Korbie, Darren and Trau, Matt (2015). Observations of tunable resistive pulse sensing for exosome analysis: improving system sensitivity and stability. Langmuir, 31 (23), 6577-6587. doi: 10.1021/acs.langmuir.5b01402

Structural characterization of nanoyeast single-chain fragment variable affinity reagents

Grewal, Yadveer S., Shiddiky, Muhammad J. A., Spadafora, Lauren J., Cangelosi, Gerard A. and Trau, Matt (2015). Structural characterization of nanoyeast single-chain fragment variable affinity reagents. The Journal of Physical Chemistry Part C: Nanomaterials, Interfaces and Hard Matter, 119 (22), 12674-12680. doi: 10.1021/acs.jpcc.5b01234

A multiplexed device based on tunable nanoshearing for specific detection of multiple protein biomarkers in serum

Vaidyanathan, Ramanathan, van Leeuwen, Lara Michelle, Rauf, Sakandar, Shiddiky, Muhammad J. A. and Trau, Matt (2015). A multiplexed device based on tunable nanoshearing for specific detection of multiple protein biomarkers in serum. Scientific Reports, 5 (1) 9756, 9756.1-9756.7. doi: 10.1038/srep09756

PARTICLE, a triplex-forming long ncRNA, regulates locus-specific methylation in response to low-dose irradiation

O'Leary, Valerie Brid, Ovsepian, Saak Victor, Carrascosa, Laura Garcia, Buske, Fabian Andreas, Radulovic, Vanja, Niyazi, Maximilian, Moertl, Simone, Trau, Matt and Atkinson, Michael John (2015). PARTICLE, a triplex-forming long ncRNA, regulates locus-specific methylation in response to low-dose irradiation. Cell Reports, 11 (3), 474-485. doi: 10.1016/j.celrep.2015.03.043

Multiplex bisulfite PCR resequencing of clinical FFPE DNA

Korbie, Darren, Lin, Erica, Wall, David, Nair, Shalima S., Stirzaker, Clare, Clark, Sue J. and Trau, Matt (2015). Multiplex bisulfite PCR resequencing of clinical FFPE DNA. Clinical Epigenetics, 7 (28) 28, 1-11. doi: 10.1186/s13148-015-0067-3

Methylome sequencing in triple negative breast cancer reveals distinct methylation clusters with prognostic value

Stirzaker, Clare, Zotenko, Elena, Song, Jenny Z., Qu, Wenja, Nair, Shalima, Locke, Warwick J., Stone, Andrew Stone, Armstrong, Nicola J., Robinson, Mark D., Dobrovic, Alexander, Avery-Kiejda, Kelly A., Peters, Kate M., French, Juliet D., Stein, Sandra, Korbie, Darren J., Trau, Matt, Forbes, John F., Scott, Rodney J., Brown, Melissa A., Francis, Glenn D. and Clark, Susan J. (2015). Methylome sequencing in triple negative breast cancer reveals distinct methylation clusters with prognostic value. Nature Communications, 6 (5899) 5899, 1-11. doi: 10.1038/ncomms6899

Re-purposing bridging flocculation for on-site, rapid, qualitative DNA detection in resource-poor settings

Wee, E. J. H., Lau, H. Y., Botella, J. and Trau, M. (2015). Re-purposing bridging flocculation for on-site, rapid, qualitative DNA detection in resource-poor settings. Chemical Communications, 51 (27), 5828-5831. doi: 10.1039/C4CC10068A

Analysis of exosome purification methods using a model liposome system and tunable-resistive pulse sensing

Lane, Rebecca E., Korbie, Darren, Anderson, Will, Vaidyanathan, Ramanathan and Trau, Matt (2015). Analysis of exosome purification methods using a model liposome system and tunable-resistive pulse sensing. Scientific Reports, 5 (1) 7639, 7639.1-7639.7. doi: 10.1038/srep07639

Highly sensitive DNA methylation analysis at CpG resolution by surface-enhanced Raman scattering via ligase chain reaction

Wang, Yuling, Wee, Eugene J. H. and Trau, Matt (2015). Highly sensitive DNA methylation analysis at CpG resolution by surface-enhanced Raman scattering via ligase chain reaction. Chemical Communications, 51 (54), 10953-10956. doi: 10.1039/c5cc03921e

Tuneable surface shear forces to physically displace nonspecific molecules in protein biomarker detection

Vaidyanathan, Ramanathan, Rauf, Sakandar, Shiddiky, Muhammad J. A. and Trau, Matt (2014). Tuneable surface shear forces to physically displace nonspecific molecules in protein biomarker detection. Biosensors and Bioelectronics, 61, 184-191. doi: 10.1016/j.bios.2014.03.061

Molecular inversion probe: a new tool for highly specific detection of plant pathogens

Lau, Han Yih, Palanisamy, Ramkumar, Trau, Matt and Botella, Jose R. (2014). Molecular inversion probe: a new tool for highly specific detection of plant pathogens. PLoS One, 9 (10) e111182, e111182.1-e111182.9. doi: 10.1371/journal.pone.0111182

Detecting exosomes specifically: a multiplexed device based on alternating current electrohydrodynamic induced nanoshearing

Vaidyanathan, Ramanathan, Naghibosadat, Maedeh, Rauf, Sakandar, Korbie, Darren, Carrascosa, Laura G., Shiddiky, Muhammad J. A. and Trau, Matt (2014). Detecting exosomes specifically: a multiplexed device based on alternating current electrohydrodynamic induced nanoshearing. Analytical Chemistry, 86 (22), 11125-11132. doi: 10.1021/ac502082b

eMethylsorb: rapid quantification of DNA methylation in cancer cells on screen-printed gold electrodes

Koo, Kevin M., Sina, Abu Ali Ibn, Carrascosa, Laura G., Shiddiky, Muhammad J. A. and Trau, Matt (2014). eMethylsorb: rapid quantification of DNA methylation in cancer cells on screen-printed gold electrodes. Analyst, 139 (23), 6178-6184. doi: 10.1039/c4an01641f

DNA ligase-based strategy for quantifying heterogeneous DNA methylation without sequencing

Wee, Eugene J. H., Rauf, Sakandar, Shiddiky, Muhammad J. A., Dobrovic, Alexander and Trau, Matt (2014). DNA ligase-based strategy for quantifying heterogeneous DNA methylation without sequencing. Clinical Chemistry, 61 (1), 163-171. doi: 10.1373/clinchem.2014.227546

eMethylsorb: electrochemical quantification of DNA methylation at CpG resolution using DNA-gold affinity interactions

Sina, Abu Ali Ibn, Howell, Sidney, Carrascosa, Laura G., Rauf, Sakandar, Shiddiky, Muhammad J. A . and Trau, Matt (2014). eMethylsorb: electrochemical quantification of DNA methylation at CpG resolution using DNA-gold affinity interactions. Chemical Communications, 50 (86), 13153-13156. doi: 10.1039/C4CC06732K

Duplex microfluidic SERS detection of pathogen antigens with nanoyeast single-chain variable fragments

Wang, Yuling, Rauf, Sakandar, Grewal, Yadveer S., Spadafora, Lauren J., Shiddiky, Muhammad J. A., Cangelosi, Gerard A., Schlücker, Sebastian and Trau, Matt (2014). Duplex microfluidic SERS detection of pathogen antigens with nanoyeast single-chain variable fragments. Analytical Chemistry, 86 (19), 9930-9938. doi: 10.1021/ac5027012

Electrochemical detection of glycan and protein epitopes of glycoproteins in serum

Shah, Alok K., Hill, Michelle M., Shiddiky, Muhammad J. A. and Trau, Matt (2014). Electrochemical detection of glycan and protein epitopes of glycoproteins in serum. Analyst, 139 (22), 5970-5976. doi: 10.1039/C4AN00781F

Enzyme catalysis: evolution made easy

Wee, Eugene J. H. and Trau, Matt (2014). Enzyme catalysis: evolution made easy. Nature Chemistry, 6 (9), 756-757. doi: 10.1038/nchem.2046

Measuring whole genome methylation via oxygen channelling chemistry

Wee, Eugene J. H. and Trau, Matt (2014). Measuring whole genome methylation via oxygen channelling chemistry. Chemical Communications, 50 (74), 10894-10896. doi: 10.1039/C4CC04623D

Microdevices for detecting locus-specific DNA methylation at CpG resolution

Koo, Kevin M., Wee, Eugene, Rauf, Sakandar, Shiddiky, Muhammad J. A. and Trau, Matt (2014). Microdevices for detecting locus-specific DNA methylation at CpG resolution. Biosensors and Bioelectronics, 56, 278-285. doi: 10.1016/j.bios.2014.01.029

Nano-yeast–scFv probes on screen-printed gold electrodes for detection of Entamoeba histolytica antigens in a biological matrix

Grewal, Yadveer S., Shiddiky, Muhammad J. A., Spadafora, Lauren J., Cangelosi, Gerard A. and Trau, Matt (2014). Nano-yeast–scFv probes on screen-printed gold electrodes for detection of Entamoeba histolytica antigens in a biological matrix. Biosensors and Bioelectronics, 55, 417-422. doi: 10.1016/j.bios.2013.12.043

Electrohydrodynamic removal of non-specific colloidal adsorption at electrode interfaces

Rauf, Sakandar, Shiddiky, Muhammad J. A. and Trau, Matt (2014). Electrohydrodynamic removal of non-specific colloidal adsorption at electrode interfaces. Chemical Communications, 50 (37), 4813-4815. doi: 10.1039/C4CC01357C

Alternating current electrohydrodynamics induced nanoshearing and fluid micromixing for specific capture of cancer cells

Vaidyanathan, Ramanathan, Rauf, Sakandar, Dray, Eloïse, Shiddiky, Muhammad J. A. and Trau, Matt (2014). Alternating current electrohydrodynamics induced nanoshearing and fluid micromixing for specific capture of cancer cells. Chemistry: A European Journal, 20 (13), 3724-3729. doi: 10.1002/chem.201304590

Molecular inversion probe-based SPR biosensing for specific, label-free and real-time detection of regional DNA methylation

Carrascosa, Laura G., Sina, Abu Ali Ibn, Palanisamy, Ramkumar, Sepulveda, Borja, Otte, Marinus A., Rauf, Sakandar, Shiddiky, Muhamad J. A. and Trau, Matt (2014). Molecular inversion probe-based SPR biosensing for specific, label-free and real-time detection of regional DNA methylation. Chemical Communications, 50 (27), 3585-3588. doi: 10.1039/C3CC49607D

Tuneable “Nano-Shearing”: a physical mechanism to displace nonspecific cell adhesion during rare cell detection

Vaidyanathan, Ramanathan, Shiddiky, Muhammad J. A., Rauf, Sakandar, Dray, Eloise, Tay, Zhikai and Trau, Matt (2014). Tuneable “Nano-Shearing”: a physical mechanism to displace nonspecific cell adhesion during rare cell detection. Analytical Chemistry, 86 (4), 2042-2049. doi: 10.1021/ac4032516

Molecular nanoshearing: an innovative approach to shear off molecules with AC-induced nanoscopic fluid flow

Shiddiky, Muhammad J. A., Vaidyanathan, Ramanathan, Rauf, Sakandar, Tay, Zhikay and Trau, Matt (2014). Molecular nanoshearing: an innovative approach to shear off molecules with AC-induced nanoscopic fluid flow. Scientific Reports, 4 (1) 3716, 3716.1-3716.7. doi: 10.1038/srep03716

Methylsorb: a simple method for quantifying DNA methylation using DNA-gold affinity interactions

Sina, Abu Ali Ibn, G. Carrascosa, Laura, Palanisamy, Ramkumar, Rauf, Sakandar, Shiddiky, Muhammad J. A. and Trau, Matt (2014). Methylsorb: a simple method for quantifying DNA methylation using DNA-gold affinity interactions. Analytical Chemistry, 86 (20), 10179-10185. doi: 10.1021/ac502214z

A comparative study of submicron particle sizing platforms: accuracy, precision and resolution analysis of polydisperse particle size distributions

Anderson, Will, Kozak, Darby, Coleman, Victoria A., Jämting, Asa K. and Trau, Matt (2013). A comparative study of submicron particle sizing platforms: accuracy, precision and resolution analysis of polydisperse particle size distributions. Journal of Colloid and Interface Science, 405, 322-330. doi: 10.1016/j.jcis.2013.02.030

mu-eLCR: a microfabricated device for electrochemical detection of DNA base changes in breast cancer cell lines

Wee, Eugene J. H., Rauf, Sakandar, Koo, Kevin, Shiddiky, Muhammad J. A. and Trau, Matt (2013). mu-eLCR: a microfabricated device for electrochemical detection of DNA base changes in breast cancer cell lines. Lab on a Chip, 13 (22), 4385-4391-4385-4391. doi: 10.1039/C3LC50528F

"Drill and fill" lithography for controlled fabrication of 3D platinum electrodes

Rauf, Sakandar, Muhammad J. A. Shiddiky and Trau, Matt (2013). "Drill and fill" lithography for controlled fabrication of 3D platinum electrodes. Sensors and Actuators B: Chemical, 185, 543-547. doi: 10.1016/j.snb.2013.05.040

Accurate detection of methylated cytosine in complex methylation landscapes

Palanisamy, Ramkumar, Connolly, Ashley R. and Trau, Matt (2013). Accurate detection of methylated cytosine in complex methylation landscapes. Analytical Chemistry, 85 (14), 6575-6579. doi: 10.1021/ac3031948

Label-free electrochemical detection of an Entamoeba histolytica antigen using cell-free yeast-scFv probes

Grewal, Yadveer S., Shiddiky, Muhammad J. A., Gray, Sean A., Weigel, Kris M., Cangelosi, Gerard A. and Trau, Matt (2013). Label-free electrochemical detection of an Entamoeba histolytica antigen using cell-free yeast-scFv probes. Chemical Communications, 49 (15), 1551-1553. doi: 10.1039/c2cc38882k

"Drill and fill" lithography: fabrication of platinum electrodes and their use in label-free immunosensing

Rauf, Sakandar, Shiddiky, Muhammad J. A., Trau, Matt and Dimitrov, Krassen (2013). "Drill and fill" lithography: fabrication of platinum electrodes and their use in label-free immunosensing. RSC Advances, 3 (13), 4189-4192. doi: 10.1039/c3ra21900c

eLCR: electrochemical detection of single DNA base changes via ligase chain reaction

Wee, Eugene J. H., Shiddiky, Muhammad J. A., Brown, Melissa A. and Trau, Matt (2012). eLCR: electrochemical detection of single DNA base changes via ligase chain reaction. Chemical Communications, 48 (98), 1214-1216. doi: 10.1039/C2CC35841G

An electrochemical immunosensor to minimize the nonspecific adsorption and to improve sensitivity of protein assays in human serum

Shiddiky, Muhammad J. A., Kithva, Prakash H., Kozak, Darby and Trau, Matt (2012). An electrochemical immunosensor to minimize the nonspecific adsorption and to improve sensitivity of protein assays in human serum. Biosensors and Bioelectronics, 38 (1), 132-137. doi: 10.1016/j.bios.2012.05.014

Tuning particle velocity and measurement sensitivity by changing pore sensor dimensions

Kozak, Darby, Anderson, Will and Trau, Matt (2012). Tuning particle velocity and measurement sensitivity by changing pore sensor dimensions. Chemistry Letters, 41 (10), 1134-1136. doi: 10.1246/cl.2012.1134

Simultaneous size and zet-potential measurements of individual nanoparticles in dispersion using size-tunable pore sensors

Kozak, Darby, Anderson, Will, Vogel, Robert, Chen, Shaun, Antaw, Fiach and Trau, Matt (2012). Simultaneous size and zet-potential measurements of individual nanoparticles in dispersion using size-tunable pore sensors. Acs Nano, 6 (8), 6990-6997. doi: 10.1021/nn3020322

Graphene/quantum dot bionanoconjugates as signal amplifiers in stripping voltammetric detection of EpCAM biomarkers

Shiddiky, Muhammad J. A., Rauf, Sakandar, Kithva, Prakash H. and Trau, Matt (2012). Graphene/quantum dot bionanoconjugates as signal amplifiers in stripping voltammetric detection of EpCAM biomarkers. Biosensors and Bioelectronics, 35 (1), 251-257. doi: 10.1016/j.bios.2012.02.057

Femtomolar detection of a cancer biomarker protein in serum with ultralow background current by anodic stripping voltammetry

Shiddiky, Muhammad J. A., Kithva, Prakash H., Rauf, Sakandar and Trau, Matt (2012). Femtomolar detection of a cancer biomarker protein in serum with ultralow background current by anodic stripping voltammetry. Chemical Communications, 48 (51), 6411-6413. doi: 10.1039/c2cc32810k

Modeling Elastic Pore Sensors for Quantitative Single Particle Sizing

Kozak, Darby, Anderson, Will, Grevett, Matthew and Trau, Matt (2012). Modeling Elastic Pore Sensors for Quantitative Single Particle Sizing. The Journal of Physical Chemistry C: Nanomaterials, Interfaces and Hard Matter, 116 (15), 8554-8561. doi: 10.1021/jp211845t

Advances in resistive pulse sensors: Devices bridging the void between molecular and microscopic detection

Kozak, Darby, Anderson, Will, Vogel, Robert and Trau, Matt (2011). Advances in resistive pulse sensors: Devices bridging the void between molecular and microscopic detection. Nano Today, 6 (5), 531-545. doi: 10.1016/j.nantod.2011.08.012

Sensitive quantification of somatic mutations using molecular inversion probes

Hirani, Rena, Connolly, Ashley R., Putral, Lisa, Dobrovic, Alexander and Trau, Matt (2011). Sensitive quantification of somatic mutations using molecular inversion probes. Analytical Chemistry, Articles ASAP (21), 8215-8221. doi: 10.1021/ac2019409

Multiplatform comparison of multiplexed bead arrays using HPV genotyping as a test case

Corrie, Simon R., Feng, Qinghua, Blair, Tiffany, Hawes, Stephen E., Kiviat, Nancy B. and Trau, Matt (2011). Multiplatform comparison of multiplexed bead arrays using HPV genotyping as a test case. Cytometry Part A, 79A (9), 713-719. doi: 10.1002/cyto.a.21109

Characterisation of amine functionalised poly(3-hydroxybuturate-co-3-hydroxyvalerate) surfaces

Luk, Jing Zhong, Rondeau, Elisabeth, Trau, Matt, Cooper-White, Justin and Grondahl, Lisbeth (2011). Characterisation of amine functionalised poly(3-hydroxybuturate-co-3-hydroxyvalerate) surfaces. Polymer, 52 (15), 3251-3258. doi: 10.1016/j.polymer.2011.05.048

Protein resistance of dextran and dextran-poly(ethylene glycol) copolymer films

Kozak, D, Chen, A, Bax, J and Trau, M (2011). Protein resistance of dextran and dextran-poly(ethylene glycol) copolymer films. Biofouling, 27 (5), 497-503. doi: 10.1080/08927014.2011.584618

Rapid DNA detection by beacon-assisted detection amplification

Connolly, Ashley R and Trau, Matt (2011). Rapid DNA detection by beacon-assisted detection amplification. Nature Protocols, 6 (6), 772-778. doi: 10.1038/nprot.2011.326

Quantitative sizing of nano/microparticles with a tunable elastomeric pore sensor

Vogel, Robert, Willmott, Geoff, Kozak, Darby, Roberts, Seth G., Anderson, Will, Groenewegen, Linda, Glossop, Ben, Barnett, Anne, Turner, Ali and Trau, Matt (2011). Quantitative sizing of nano/microparticles with a tunable elastomeric pore sensor. Analytical Chemistry, 83 (9), 3499-3506. doi: 10.1021/ac200195n

Epiallele quantification using molecular inversion probes

Palanisamy, Ramkumar, Connolly, Ashley R. and Trau, Matt (2011). Epiallele quantification using molecular inversion probes. Analytical Chemistry, 83 (7), 2631-2637. doi: 10.1021/ac103016n

Bisulfite-free analysis of 5MeC-binding proteins and locus-specific methylation density using a microparticle-based flow cytometry assay

Corrie, Simon R., Sova, Pavel, Feng, Qinghua, Blair, Tiffany, Kiviat, Nancy B. and Trau, Matt (2011). Bisulfite-free analysis of 5MeC-binding proteins and locus-specific methylation density using a microparticle-based flow cytometry assay. Analyst, 136 (4), 688-691. doi: 10.1039/c0an00790k

Improvement of the wet tensile properties of nanostructured hydroxyapatite and chitosan biocomposite films through hydrophobic modification

Pradal, Clementine, Kithva, Prakash, Martin, Darren, Trau, Matt and Grøndahl, Lisbeth (2011). Improvement of the wet tensile properties of nanostructured hydroxyapatite and chitosan biocomposite films through hydrophobic modification. Journal of Materials Chemistry, 21 (7), 2330-2337. doi: 10.1039/c0jm03080e

Effect of poly(ethylene glycol) (PEG) spacers on the conformational properties of small peptides: A molecular dynamics study

Xue, Ying, O'Mara, Megan L., Surawski, Peter P. T., Trau, Matt and Mark, Alan E. (2011). Effect of poly(ethylene glycol) (PEG) spacers on the conformational properties of small peptides: A molecular dynamics study. Langmuir, 27 (1), 296-303. doi: 10.1021/la103800h

Development of encoded particle-polymer arrays for the accelerated screening of antifouling layers

Kozak, Darby, Kithva, Prakash, Bax , Jacinda, Surawski, Peter P. T., Monteiro, Michael J. and Trau, Matt (2011). Development of encoded particle-polymer arrays for the accelerated screening of antifouling layers. Chemical Communications, 47 (34), 9687-9689. doi: 10.1039/c1cc13571f

Tunable nano/micropores for particle detection and discrimination: Scanning ion occlusion spectroscopy

Roberts, G. Seth, Kozak, Darby, Anderson, Will, Broom, Murray F., Vogel, Robert and Trau, Matt (2010). Tunable nano/micropores for particle detection and discrimination: Scanning ion occlusion spectroscopy. Small, 6 (23), 2653-2658. doi: 10.1002/smll.201001129

Use of tunable nanopore blockade rates to investigate colloidal dispersions

Willmott, G. R., Vogel, R., Yu, S. S. C., Groenewegen, L. G., Roberts, G. S., Kozak, D., Anderson, W. and Trau, M. (2010). Use of tunable nanopore blockade rates to investigate colloidal dispersions. Journal of Physics: Condensed Matter, 22 (45) 454116, 454116-1-454116-11. doi: 10.1088/0953-8984/22/45/454116

Considerations of solid-phase DNA amplification

Palanisamy, Ramkumar, Connolly, Ashley R. and Trau, Matt (2010). Considerations of solid-phase DNA amplification. Bioconjugate Chemistry, 21 (4), 690-695. doi: 10.1021/bc900491s

Isothermal detection of DNA by beacon-assisted detection amplification

Connolly, Ashley R. and Trau, Matt (2010). Isothermal detection of DNA by beacon-assisted detection amplification. Angewandte Chemie (International Edition), 49 (15), 2720-2723. doi: 10.1002/anie.200906992

Tissue transplantation by stealth — Coherent alginate microcapsules for immunoisolation

Leung, Andy, Nielsen, Lars K., Trau, Matt and Timmins, Nicholas E. (2010). Tissue transplantation by stealth — Coherent alginate microcapsules for immunoisolation. Biochemical Engineering Journal, 48 (3), 337-347. doi: 10.1016/j.bej.2009.10.007

'On-the-fly' optical encoding of combinatorial peptide libraries for profiling of protease specificity

Marcon, Lionel, Battersby, Bronwyn J., Ruhmann, Andreas, Ford, Kym, Daley, Matthew, Lawrie, Gwendolyn A. and Trau, Matt (2010). 'On-the-fly' optical encoding of combinatorial peptide libraries for profiling of protease specificity. Molecular Biosystems, 6 (1), 225-233. doi: 10.1039/b909087h

Biomimetic synthesis and tensile properties of nanostructured high volume fraction hydroxyapatite and chitosan biocomposite films

Kithva, P., Grondahl, L., Martin, D. and Trau, M. (2010). Biomimetic synthesis and tensile properties of nanostructured high volume fraction hydroxyapatite and chitosan biocomposite films. Journal of Materials Chemistry, 20 (2), 381-389. doi: 10.1039/b914798e

Quantitative considerations for suspension array assays

Connolly, A.R., Palanisamy, R. and Trau, M. (2010). Quantitative considerations for suspension array assays. Journal of Biotechnology, 145 (1), 17-22. doi: 10.1016/j.jbiotec.2009.10.004

Development of a multiplexed bead-based assay for detection of DNA methylation in cancer-related genes

Corrie, Simon, Sova, Pavel, Lawrie, Gwen, Battersby, Bronwyn, Kiviat, Nancy and Trau, Matt (2009). Development of a multiplexed bead-based assay for detection of DNA methylation in cancer-related genes. Molecular Biosystems, 5 (3), 262-268. doi: 10.1039/b813077a

Antifouling Surface Layers for Improved Signal-to-Noise of Particle-Based Immunoassays

Chen, A., Kozak, D., Battersby, B.J., Forrest, R.M., Scholler, N., Urban, N. and Trau, M. (2009). Antifouling Surface Layers for Improved Signal-to-Noise of Particle-Based Immunoassays. Langmuir, 25 (23), 13510-13515. doi: 10.1021/la903148n

An organic matrix-mediated processing methodology to fabricate hydroxyapatite based nanostructured biocomposites

Kithva, Prakash Hariram, Grondahl, Lisbeth, Kumar, Rajendra, Martin, Darren and Trau, Matt (2009). An organic matrix-mediated processing methodology to fabricate hydroxyapatite based nanostructured biocomposites. Nanoscale, 1 (2), 229-232. doi: 10.1039/b9nr00062c

Biosensing cancer biomarkers

Trau, M. and Battersby, B. (2009). Biosensing cancer biomarkers. The Chemical Engineer (820), 30-31.

Synthesis and Application of FRET Nanoparticles in the Profiling of a Protease

Marcon, L., Spriet, C., Meehan, T.D., Battersby, B.J., Lawrie, G.A., Heliot, L. and Trau, M. (2009). Synthesis and Application of FRET Nanoparticles in the Profiling of a Protease. Small, 5 (18), 2053-2056. doi: 10.1002/smll.200801887

The fabrication and characterization of biodegradable HA/PHBV nanoparticle-polymer composite scaffolds

Jack, Kevin S., Velayudhan, Shiny, Luckman, Paul, Trau, Matt, Grondahl, Lisbeth and Cooper-White, Justin (2009). The fabrication and characterization of biodegradable HA/PHBV nanoparticle-polymer composite scaffolds. Acta Biomaterialia, 5 (7), 2567-2667. doi: 10.1016/j.actbio.2009.03.017

Improving the Signal-to-Noise Performance of Molecular Diagnostics with PEG-Lysine Copolymer Dendrons

Kozak, D., Surawski, P., Thoren, K.M., Lu, C.Y., Marcon, L. and Trau, M. (2009). Improving the Signal-to-Noise Performance of Molecular Diagnostics with PEG-Lysine Copolymer Dendrons. BIOMACROMOLECULES, 10 (2), 360-365. doi: 10.1021/bm8011314

Understanding the roles of nanoparticle dispersion and polymer crystallinity in controlling the mechanical properties of HA/PHBV nanocomposites

Noohom, Wadcharawadee, Jack, Kevin S., Martin, Darren and Trau, Matt (2009). Understanding the roles of nanoparticle dispersion and polymer crystallinity in controlling the mechanical properties of HA/PHBV nanocomposites. Biomedical Materials, 4 (015003), 015003. doi: 10.1088/1748-6041/4/1/015003

Assembly of multilayer PSS/PAH membrane on coherent alginate/PLO microcapsule for long-term graft transplantation

Leung, Andy, Trau, Matt and Nielsen, Lars Keld (2009). Assembly of multilayer PSS/PAH membrane on coherent alginate/PLO microcapsule for long-term graft transplantation. Journal of Biomedical Materials Research Part A, 88A (1), 226-237. doi: 10.1002/jbm.a.31891

Modification and optimization of organosilica microspheres for peptide synthesis and microsphere-based immunoassays

Surawski, PPT, Battersby, BJ, Vogel, R, Lawrie, G and Trau, M (2009). Modification and optimization of organosilica microspheres for peptide synthesis and microsphere-based immunoassays. Molecular Biosystems, 5 (8), 826-831. doi: 10.1039/b817080k

Combining chemistry and biology to create colloidally stable bionanohydroxyapatite particles: Toward load-bearing bone applications

Rai, B., Grondahl, L. and Trau, M. (2008). Combining chemistry and biology to create colloidally stable bionanohydroxyapatite particles: Toward load-bearing bone applications. Langmuir, 24 (15), 7744-7749. doi: 10.1021/la8005212

Particle-by-particle quantification of protein adsorption onto poly(ethylene glycol) grafted surfaces

Chen, Annie, Kozak, Darby, Battersby, Bronwyn J. and Trau, Matt (2008). Particle-by-particle quantification of protein adsorption onto poly(ethylene glycol) grafted surfaces. Biofouling, 24 (4), 267-273. doi: 10.1080/08927010802058471

Quantitative data analysis methods for bead-based DNA hybridization assays using generic flow cytometry platforms

Corrie, S. R., Lawrie, G. A., Battersby, B. J., Ford, K., Rühmann, A., Koehler, K., Sabath, D. E. and Trau, M. (2008). Quantitative data analysis methods for bead-based DNA hybridization assays using generic flow cytometry platforms. Cytometry. Part A, 73A (5), 467-476. doi: 10.1002/cyto.a.20534

Flow cytometric detection of proteolysis in peptide libraries synthesised on optically encoded supports

Surawski, Peter P. T., Battersby, Bronwyn J., Lawrie, Gwendolyn A., Ford, Kym, Ruhmann, Andreas, Marcon, Lionel, Kozak, Darby and Trau, Matt (2008). Flow cytometric detection of proteolysis in peptide libraries synthesised on optically encoded supports. Molecular Biosystems, 4 (7), 774-778. doi: 10.1039/b718513h

Bionanohydroxyapatite/Poly(3-hydroxybutyrate-co-3-hydroxyvalerate) composites with improved particle dispersion and superior mechanical properties

Rai, B., Noohom, W., Kithva, P.H., Grondahl, L. and Trau, M. (2008). Bionanohydroxyapatite/Poly(3-hydroxybutyrate-co-3-hydroxyvalerate) composites with improved particle dispersion and superior mechanical properties. Chemistry of Materials, 20 (8), 2802-2808. doi: 10.1021/cm703045u

Profiling protein-surface interactions of multicomponent suspensions via flow cytometry

Kozak, Darby, Chen, Annie and Trau, Matt (2008). Profiling protein-surface interactions of multicomponent suspensions via flow cytometry. Langmuir, 24 (4), 1204-1211. doi: 10.1021/la701847x

A dual-purpose synthetic colloidal platform for protease mapping: substrate profiling for Dengue and West Nile virus proteases

Marcon, L., Kozak, D., Battersby, B.J., Chappell, K., Fairlie, D., Young, P.R. and Trau, M. (2008). A dual-purpose synthetic colloidal platform for protease mapping: substrate profiling for Dengue and West Nile virus proteases. Analytical Biochemistry, 2008 (376), 151-153. doi: 10.1016/j.ab.2008.01.034

A structural study of hybrid organosilica materials for colloid-based DNA biosensors

Corrie, Simon R., Vogel, Robert, Keen, Imelda, Jack, Kevin, Kozak, Darby, Lawrie, Gwendolyn A., Battersby, Bronwyn J., Fredericks, Peter and Trau, Matt (2008). A structural study of hybrid organosilica materials for colloid-based DNA biosensors. Journals of Materials Chemistry, 18 (5), 523-529. doi: 10.1039/b714309e

Synthesis and characterization of alginate/poly-L-ornithine/alginate microcapsules for local immunosuppression

Leung, A.H.M., Lawrie, G.A., Nielsen, L.K. and Trau, M. (2008). Synthesis and characterization of alginate/poly-L-ornithine/alginate microcapsules for local immunosuppression. Journal of Microencapsulation, 25 (6), 387-398. doi: 10.1080/02652040802008857

Toward colloid-based biosensors for SNP genotyping and personalised medicine applications

Johnston, Angus P. R., Lawrie, Gwendolyn A., Battersby, Bronwyn J., Corrie, Simon R. and Trau, Matt (2008). Toward colloid-based biosensors for SNP genotyping and personalised medicine applications. International Journal of Nanotechnology, 5 (2-3), 299-317. doi: 10.1504/IJNT.2008.016920

Fluorescent organosilica micro- and nanoparticles with controllable size

Vogel, R., Surawski, P.T., Littleton, B. N., Miller, C., Lawrie, G. A., Battersby, B. J. and Trau, M. (2007). Fluorescent organosilica micro- and nanoparticles with controllable size. Journal of Colloid and Interface Science, 310 (1), 144-150. doi: 10.1016/j.jcis.2007.01.092

Investigations into poly(3-hydroxybutyrate-co-3-hydroxyvalerate) surface properties causing delayed osteoblast growth

Keen, I., Raggatt, L.J., Cool, S.M., Nurcombe, V., Fredericks, P., Trau, M. and Grondahl, L. (2007). Investigations into poly(3-hydroxybutyrate-co-3-hydroxyvalerate) surface properties causing delayed osteoblast growth. Journal of Biomaterials Science-polymer Edition, 18 (9), 1101-1123. doi: 10.1163/156856207781554046

Poly(3-hydroxybutyrate-co-3-hydroxyvalerate) composite biomaterials for bone tissue regeneration: In vitro performance assessed by osteoblast proliferation, osteoclast adhesion and resorption, and macrophage proinflammatory response

Cool, SM, Kenny, B, Wu, A, Nurcombe, V, Trau, M, Cassady, AI and Grondahl, L (2007). Poly(3-hydroxybutyrate-co-3-hydroxyvalerate) composite biomaterials for bone tissue regeneration: In vitro performance assessed by osteoblast proliferation, osteoclast adhesion and resorption, and macrophage proinflammatory response. Journal of Biomedical Materials Research Part A, 82A (3), 599-610. doi: 10.1002/jbm.a.31174

Characterization and surface properties of amino-acid-modified, carbonate-containing hydroxyapatite particles

Jack, K.S., Vizcarra, T.G. and Trau, M. (2007). Characterization and surface properties of amino-acid-modified, carbonate-containing hydroxyapatite particles. Langmuir, 23 (24), 12233-12242. doi: 10.1021/la701848c

Optically encoded particles and their applications in multiplexed biomedical assays

Battersby, B.J. and Trau, M. (2007). Optically encoded particles and their applications in multiplexed biomedical assays. Australian Journal of Chemistry, 60 (5), 343-353. doi: 10.1071/CH07006

Refractometry of organosilica microspheres

Seet, K. Y. T., Vogel, R., Nieminen, T. A., Knoner, G., Rubinsztein-Dunlop, H., Trau, M. and Zvyagin, A. V. (2007). Refractometry of organosilica microspheres. Applied Optics, 46 (9), 1554-1561. doi: 10.1364/AO.46.001554

A mechanism for forming large fluorescent organo-silica particles: Potential supports for combinatorial synthesis

Johnston, Angus P. R., Battersby, Bronwyn J., Lawrie, Gwendolyn A., Lambert, Lynette K. and Trau, Matt (2006). A mechanism for forming large fluorescent organo-silica particles: Potential supports for combinatorial synthesis. Chemistry of Materials, 18 (26), 6163-6169. doi: 10.1021/cm0526260

Introducing amine functionalities on a poly(3-hydroxybutyrate-co-3-hydroxyvalerate) surface: Comparing the use of ammonia plasma treatment and ethylenediamine aminolysis

Keen, I., Broota, P., Rintoul, L., Fredericks, P., Trau, M. and Grondahl, L. (2006). Introducing amine functionalities on a poly(3-hydroxybutyrate-co-3-hydroxyvalerate) surface: Comparing the use of ammonia plasma treatment and ethylenediamine aminolysis. Biomacromolecules, 7 (2), 427-434. doi: 10.1021/bm050497a

Multiplexed microsphere diagnostic tools in gene expression applications: Factors and futures

Lawrie, Gwendolyn A., Robinson, Jodie, Corrie, Simon, Ford, Kym, Battersby, Bronwyn J. and Trau, Matt (2006). Multiplexed microsphere diagnostic tools in gene expression applications: Factors and futures. International Journal Nanomedicine, 1 (2), 195-201. doi: 10.2147/nano.2006.1.2.195

Quantitative analysis and characterization of biofunctionalized fluorescent silica particles

Corrie, Simon R., Lawrie, Gwendolyn A. and Trau, Matt (2006). Quantitative analysis and characterization of biofunctionalized fluorescent silica particles. Langmuir, 22 (6), 2731-2737. doi: 10.1021/la052433r

Reduction of the in vitro pro-inflammatory response by macrophages to poly(3-hydroxybutyrate-co-3-hydroxyvalerate)

Wu, Andy C. K., Grondahl, Lisbeth, Jack, Kevin S., Foo, Michelle X., Trau, Matt, Hume, David A. and Cassady, Alan I. (2006). Reduction of the in vitro pro-inflammatory response by macrophages to poly(3-hydroxybutyrate-co-3-hydroxyvalerate). Biomaterials, 27 (27), 4715-4725. doi: 10.1016/j.biomaterials.2006.05.010

Tailoring surface properties to build colloidal diagnostic devices: Controlling interparticle associations

Lawrie, Gwendolyn, Grondahl, Lisbeth, Battersby, Bronwyn, Keen, Imelda, Lorentzen, Michael, Surawski, Peter and Trau, Matt (2006). Tailoring surface properties to build colloidal diagnostic devices: Controlling interparticle associations. Langmuir, 22 (1), 497-505. doi: 10.1021/la051833b

Functionalized organosilica microspheres via a novel emulsion-based route

Miller, CR, Vogel, R, Surawski, PPT, Jack, KS, Corrie, SR and Trau, M (2005). Functionalized organosilica microspheres via a novel emulsion-based route. Langmuir, 21 (21), 9733-9740. doi: 10.1021/la0514112

Biomolecular screening with novel organosilica microspheres

Miller, C. R., Vogel, R., Surawski, P. P. T., Corrie, S. R., Ruhmann, A. and Trau, M. (2005). Biomolecular screening with novel organosilica microspheres. Chemical Communications, 2005 (38), 4783-4785. doi: 10.1039/b509503d

Emulsion strategies in the microencapsulation of cells: Pathways to thin coherent membranes

Leung, A, Ramaswamy, Y, Munro, P, Lawrie, G, Nielsen, L and Trau, M (2005). Emulsion strategies in the microencapsulation of cells: Pathways to thin coherent membranes. Biotechnology And Bioengineering, 92 (1), 45-53. doi: 10.1002/bit.20597

Polymeric grafting of acrylic acid onto poly(3-hydroxybutyrate-co-3-hydroxyvalerate): Surface functionalization for tissue engineering applications

Grondahl, Lisbeth, Chandler-Temple, Adrienne and Trau, Matt (2005). Polymeric grafting of acrylic acid onto poly(3-hydroxybutyrate-co-3-hydroxyvalerate): Surface functionalization for tissue engineering applications. Biomacromolecules, 6 (4), 2197-2203. doi: 10.1021/bm050127m

Porous functionalised silica particles: a potential platform for biomolecular screening

Johnston, APR, Battersby, BJ, Lawrie, GA and Trau, M (2005). Porous functionalised silica particles: a potential platform for biomolecular screening. Chemical Communications, 7 (-), 848-850. doi: 10.1039/b415376f

Bioballs: manipulating colloidal nanostructures for biotechnology applications

Lawrie, G. A., Battersby, B. J. and Trau, M. (2004). Bioballs: manipulating colloidal nanostructures for biotechnology applications. Applied Nanoscience, 1 (1), 17-24.

Postsynthesis stabilization of free-standing mesoporous silica films

Vogel, R, Dobe, C, Whittaker, A, Edwards, G, Riches, JD, Harvey, M, Trau, M and Meredith, P (2004). Postsynthesis stabilization of free-standing mesoporous silica films. Langmuir, 20 (7), 2908-2914. doi: 10.1021/la035788o

Advances in encoding of colloids for combinatorial libraries: Applications in genomics, proteomics and drug discovery

Lawrie, G. A., Battersby, B. J., Grondahl, L. and Trau, M. (2003). Advances in encoding of colloids for combinatorial libraries: Applications in genomics, proteomics and drug discovery. Current Pharmaceutical Biotechnology, 4 (6), 439-449. doi: 10.2174/1389201033377256

Mesoporous dye-doped titanium dioxide for micro-optoelectronic applications

Vogel, Robert, Meredith, Paul, Kartini, Indriana, Harvey, Michael, Riches, Jamie D., Bishop, Alexis, Heckenberg, Norman, Trau, Matt and Rubinsztein-Dunlop, Halina (2003). Mesoporous dye-doped titanium dioxide for micro-optoelectronic applications. ChemPhysChem, 4 (6), 595-603. doi: 10.1002/cphc.200200494

Analysis of RNA-protein interactions by flow cytometry

Brodsky, AS, Johnston, AP, Trau, M and Silver, PA (2003). Analysis of RNA-protein interactions by flow cytometry. Current Opinion In Molecular Therapeutics, 5 (3), 235-240.

Analysis of the phase behavior of the aqueous poly(ethylene glycol)-Ficoll system

Croll, T., Munro, P., Winzor, D. J., Trau, M. and Nielsen, L. K. (2003). Analysis of the phase behavior of the aqueous poly(ethylene glycol)-Ficoll system. Biotechnology Progress, 19 (4), 1269-1273. doi: 10.1021/bp025711a

Micropatterned lead zirconium titanate thin films

Vartuli, JS, Ozenbas, M, Chun, CM, Trau, M and Aksay, IA (2003). Micropatterned lead zirconium titanate thin films. Journal of Materials Research, 18 (5), 1259-1265. doi: 10.1557/JMR.2003.0173

Quantitative prediction of phase diagrams for polymer partitioning in aqueous two-phase systems

Croll, T., Munro, P. D., Winzor, D. J., Trau, M. and Nielsen, L. K. (2003). Quantitative prediction of phase diagrams for polymer partitioning in aqueous two-phase systems. Journal of Polymer Science Part B-polymer Physics, 41 (5), 437-443. doi: 10.1002/polb.10402

Synthesis of optically complex core-shell colloidal suspensions: Pathways to multiplexed biological screening

Lawrie, GA, Battersby, BJ and Trau, M (2003). Synthesis of optically complex core-shell colloidal suspensions: Pathways to multiplexed biological screening. Advanced Functional Materials, 13 (11), 887-896. doi: 10.1002/adfm.200304390

Dimer-to-monomer transformation of Rhodamine 6G in aqueous PEO−PPO−PEO block copolymer solutions

Vogel, R., Harvey, M., Edwards, G., Meredith, P., Heckenberg, N., Trau, M. and Rubinsztein-Dunlop, H. (2002). Dimer-to-monomer transformation of Rhodamine 6G in aqueous PEO−PPO−PEO block copolymer solutions. Macromolecules, 35 (6), 2063-2070. doi: 10.1021/ma010995l

Novel miniaturized systems in high-throughput screening

Battersby, BJ and Trau, M (2002). Novel miniaturized systems in high-throughput screening. Trends In Biotechnology, 20 (4), 167-173. doi: 10.1016/S0167-7799(01)01898-4

Optical barcoding of colloidal suspensions: applications in genomics, proteomics and drug discovery

Battersby, Bronwyn J., Lawrie, Gwendolyn A., Johnston, Angus P. R. and Trau, Matt (2002). Optical barcoding of colloidal suspensions: applications in genomics, proteomics and drug discovery. Chemical Communications, 2 (14), 1435-1441. doi: 10.1039/b200038p

Chemistry for the future at the IUPAC World Chemistry Congress

Trau, M (2001). Chemistry for the future at the IUPAC World Chemistry Congress. Australian Journal of Chemistry, 54 (9-10), 549-549. doi: 10.1071/CH02028

Multi-fluorescent silica colloids for encoding large combinatorial libraries

Matthews, D. C., Grondahl, L., Battersby, B. J. and Trau, M. (2001). Multi-fluorescent silica colloids for encoding large combinatorial libraries. Australian Journal of Chemistry, 54 (9-10), 649-656. doi: 10.1071/CH01120

Novel colloidal materials for high-throughput screening applications in drug discovery and genomics

Trau, M and Battersby, BJ (2001). Novel colloidal materials for high-throughput screening applications in drug discovery and genomics. Advanced Materials, 13 (12-13), 975-+. doi: 10.1002/1521-4095(200107)13:12/13<975::AID-ADMA975>3.0.CO;2-#

Optical encoding of microbeads for gene screening: alternatives to microarrays

Battersby, BJ, Lawrie, GA and Trau, M (2001). Optical encoding of microbeads for gene screening: alternatives to microarrays. Drug Discovery Today, 6 (12), S19-S26. doi: 10.1016/s1359-6446(01)00149-0

Encoding combinatorial libraries: A novel application of fluorescent silica colloids

Grondahl, Lisbeth, Battersby, Bronwyn J., Bryant, Darryn and Trau, Matt (2000). Encoding combinatorial libraries: A novel application of fluorescent silica colloids. Langmuir, 16 (25), 9709-9715. doi: 10.1021/la000995z

Toward larger chemical libraries: Encoding with fluorescent colloids in combinatorial chemistry

Battersby, Bronwyn J., Bryant, Darryn, Meutermans, Wim, Matthews, Daniel, Smythe, Mark L. and Trau, Matt (2000). Toward larger chemical libraries: Encoding with fluorescent colloids in combinatorial chemistry. Journal of the American Chemical Society, 122 (9), 2138-2139. doi: 10.1021/ja993634i

Microscopic patterning of orientated mesoscopic silica through guided growth

Trau, M., Yao, N., Kim, E, Xia, Y, Whitesides, G. M. and Aksay, I. A. (1997). Microscopic patterning of orientated mesoscopic silica through guided growth. Nature, 390 (6661), 674-676. doi: 10.1038/37764

Assembly of colloidal crystals at electrode interfaces

Trau, M., Saville, D. A. and Aksay, I. A. (1997). Assembly of colloidal crystals at electrode interfaces. Langmuir, 13 (24), 6375-6381. doi: 10.1021/la970568u

Mesoporous silicate film growth at the air-water interface: direct observation by x-ray reflectivity

Brown, A. S., Holt, S. A., Dam, Thien, Trau, M. and White, J. W. (1997). Mesoporous silicate film growth at the air-water interface: direct observation by x-ray reflectivity. Langmuir, 13 (24), 6363-6365. doi: 10.1021/la970832j

Biomimetic pathways for assembling inorganic thin films

Aksay, I. A., Trau, M., Manne, S., Honma, I., Yao, N., Zhou, L., Fenter, P., Eisenberger, P. M. and Gruner, S. M. (1996). Biomimetic pathways for assembling inorganic thin films. Science, 273 (5277), 892-898. doi: 10.1126/science.273.5277.892

Field-induced layering of colloidal crystals

Trau, M., Saville, D. A. and Aksay, I. A. (1996). Field-induced layering of colloidal crystals. Science, 272 (5262), 706-709. doi: 10.1126/science.272.5262.706

Pattern formation in nonaqueous colloidal dispersions via electrohydrodynamic flow

Trau, M., Sankaran, S., Saville, D. A. and Aksay, I. A. (1995). Pattern formation in nonaqueous colloidal dispersions via electrohydrodynamic flow. Langmuir, 11 (12), 4665-4672. doi: 10.1021/la00012a015

Electric-field-induced pattern formation in colloidal dispersions

Trau, M., Sankaran, S., Saville, D. A. and Aksay, I. A. (1995). Electric-field-induced pattern formation in colloidal dispersions. Nature, 374 (6521), 437-439. doi: 10.1038/374437a0

Evanescent wave spectroscopy: application to the study of the spatial distribution of charged groups on an adsorbed polyelectrolyte at the silica/water interface

Trau, Mathias, Grieser, Franz, Healy, Thomas W. and White, Lee R. (1994). Evanescent wave spectroscopy: application to the study of the spatial distribution of charged groups on an adsorbed polyelectrolyte at the silica/water interface. Journal of the Chemical Society, Faraday Transactions, 90 (9), 1251-1259. doi: 10.1039/FT9949001251

Investigation by evanescent waves of the charge and conformation of an adsorbed polyelectrolyte at the silica/aqueous solution interface

Trau, Mathias, Grieser, Franz, Healy, Thomas W. and White, Lee R. (1992). Investigation by evanescent waves of the charge and conformation of an adsorbed polyelectrolyte at the silica/aqueous solution interface. Langmuir, 8 (10), 2349-2353. doi: 10.1021/la00046a001

An ellipsometric study of thin films on silica plates formed by alkylchlorosilylation reagents

Trau, Mathias, Murray, Brent Stuart, Grant, Kasenya and Grieser, Franz (1992). An ellipsometric study of thin films on silica plates formed by alkylchlorosilylation reagents. Journal of Colloid and Interface Science, 148 (1), 182-189. doi: 10.1016/0021-9797(92)90126-7

The entry of free radicals into polystyrene latex particles

Adams, Mary E., Trau, Mathias, Gilbert, Robert G., Napper, Donald H. and Sangster, David F. (1988). The entry of free radicals into polystyrene latex particles. Australian Journal of Chemistry, 41 (12), 1799-1813. doi: 10.1071/CH9881799

Extracellular Small Vesicle Phosphorylated PD-L1 Liquid Biopsy Levels Correlate with Tumour Proportion Score (TPS) in NSCLC

O'Byrne, K., Shanmugasundaram, K.B., Ahmed, E., Kulasinghe, A., Monkman, J., Fletcher, J.A., Mainwaring, P.N., Masud, M.K., Park, H., Hossain, M.S.A., Yamauchi, Y., Sina, A.A.I., Wuethrich, A. and Trau, M. (2023). Extracellular Small Vesicle Phosphorylated PD-L1 Liquid Biopsy Levels Correlate with Tumour Proportion Score (TPS) in NSCLC. 2023 World Conference on Lung Cancer, Singapore, 9-12 September 2023. New York, NY United States: Elsevier. doi: 10.1016/j.jtho.2023.09.432

Towards precision medicine: A cancer molecular subtyping nano-strategy for RNA biomarkers in tumor and urine

Koo, K., Wee, E., Mainwaring, P., Wang, Y. and Trau, M. (2016). Towards precision medicine: A cancer molecular subtyping nano-strategy for RNA biomarkers in tumor and urine. 28th EORTC-NCI-AACR Symposium on Molecular Targets and Cancer Therapeutics, Munich Germany, November 29 - December 2 2016. United Kingdom: Pergamon. doi: 10.1016/S0959-8049(16)32680-6

Enabling rapid and specific SERS immunoassay using nano-scaled surface shear forces

Vaidyanathan, Ramanathan, Wang, Yuling, Shiddiky, Muhammad J. A. and Trau, Matt (2015). Enabling rapid and specific SERS immunoassay using nano-scaled surface shear forces. 19th International Conference on Miniaturized Systems for Chemistry and Life Sciences, Gyeongju, Korea, 25-29 October 2015. Washington, DC USA: Chemical and Biological Microsystems Society.

Towards rapid and cost-effective point-of-care detection of TMPRSS2:ERG fusion transcripts in urine via a novel methodology

Wee, Eugene J. H., Koo, Kevin M., Mainwaring, Paul N. and Trau, Mattias (2015). Towards rapid and cost-effective point-of-care detection of TMPRSS2:ERG fusion transcripts in urine via a novel methodology. Annual Meeting of the American Society of Clinical Oncology (ASCO), Chicago, IL United States, 29 May-02 June 2015. Alexandria, VA United States: American Society of Clinical Oncology.

A Multiplex Device Based on Tunable Nanoshear Forces for Highly Specific Detection of Multiple Protein Biomarkers

Vaidyanathan, Ramanathan, van Leeuwen, Lara Michelle, Rauf, Sakandar, Shiddiky, Muhammad J. A and Trau, Matt (2014). A Multiplex Device Based on Tunable Nanoshear Forces for Highly Specific Detection of Multiple Protein Biomarkers. 18th International Conference on Miniaturized Systems for Chemistry and Life Sciences, San Antonio, TX United States, 26-30 October 2014. San Antonio, TX United States: MicroTAS.

Detecting Exosomes Specifically: a Microfluidic Approach Based on Alternating Current Electrohydrodynamic Induced Nanoshearing

Shiddiky, Muhammad J, Vaidyanathan, Ramanathan, Naghibosadat, Maedeh, Rauf, Sakandar, Korbie, Darren, Carrascosa, Laura G and Trau, Matt (2014). Detecting Exosomes Specifically: a Microfluidic Approach Based on Alternating Current Electrohydrodynamic Induced Nanoshearing. 18th International Conference on Miniaturized Systems for Chemistry and Life Sciences, San Antonio, TX United States, 26-30 October 2014. San Antonio, TX United States: MicroTAS.

Methylsorb: A Simple Method for Quantifying DNA Methylation Using DNA-gold Affinity Interactions

Shiddiky, Muhammad J, Sina, Abu Ali Ibn, Carracosa, Laura G, Palanisamy, Ramkumar, Rauf, Sakandar and Trau, Matt (2014). Methylsorb: A Simple Method for Quantifying DNA Methylation Using DNA-gold Affinity Interactions. 8th International Conference on Electrical and Computer Engineering, Dhaka, Bangladesh, 20-22 December 2014. New York, NY United States: I E E E. doi: 10.1109/ICECE.2014.7027002

Tunable Nano-Shearing: Some New Ideas for Capturing Ctcs and Rare Molecules From Blood

Trau, Matt (2014). Tunable Nano-Shearing: Some New Ideas for Capturing Ctcs and Rare Molecules From Blood. COSA's 41st Annual Scientific Meeting. Joining Forces - Accelerating Progress, Melbourne, VIC Australia, 2-4 December 2014. Chichester, West Sussex, United Kingdom: Wiley-Blackwell Publishing. doi: 10.1111/ajco.12304

Tuneable "nanoshearing": an innovative mechanism for the accurate and specific capture of rare cancer cells

Shiddiky, Muhammad J. A., Vaidyanathan, Ramanathan, Rauf, Sakandar, Tay, Zhikai and Trau, Matt (2013). Tuneable "nanoshearing": an innovative mechanism for the accurate and specific capture of rare cancer cells. μTAS 2013: The 17th International Conference on Miniaturised Systems for Chemistry and Life Sciences (MicroTAS 2013), Freiburg, Germany, 27-31 October, 2013. San Diego, CA, USA: The Chemical and Biological Microsystems Society (CBMS).

Understanding and control of mechanical properties of HA/PHBV nanocomposites for bone applications

Noohom, Wadcharawadee, Jack, Kevin S., Martin, Darren J. and Trau, Matt (2009). Understanding and control of mechanical properties of HA/PHBV nanocomposites for bone applications. 8th World Biomaterials Conference, Amsterdam, Netherlands, 28 May- 1 June, 2008. Red Hook, N.Y. U.S.A.: Curran Associates, Inc..

Quantitative data analysis methods for bead-based DNA hybridization assays using generic flow cytometry platforms

Corrie, S. R., Lawrie, G. A., Battersby, B. J., Ford, K., Ruhmann, A., Koehler, K., Sabath, D. E. and Trau, M. (2007). Quantitative data analysis methods for bead-based DNA hybridization assays using generic flow cytometry platforms. Association for Molecular Pathology 2007 Annual Meeting, The Hyatt Regency Century Plaza Hotel, Los Angeles, California, 7-10 November, 2007. Bethesda, MD: American Society for Investigative Pathology and the Association of Molecular Pathology.

Minimization of pro-inflammatory responses of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) for use in bone tissue engineering

Wu, A. C., Grondahl, L., Jack, K. S., Trau, M. and Cassady, A. I. (2006). Minimization of pro-inflammatory responses of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) for use in bone tissue engineering. 28th Australasian Polymer Symposium & Australian Society for Biomat, Rotorua, 5-9th February, 2006.

Organosilica particles for DNA screening applications

Corrie, Simon, Lawrie, Gwen, Battersby, Bronwyn and Trau, Matt (2006). Organosilica particles for DNA screening applications. ICONN 2006: International Conference On Nanoscience and Nanotechnology, Brisbane, QLD, Australia, 3-7 July, 2006. Piscataway, NJ, USA: IEEE. doi: 10.1109/ICONN.2006.340599

Tailoring poly(3-hydroxybutyrate-co-3-hydroxyvalerate) for bone tissue engineering

Grondahl, L, Keen, I, Raggatt, L, Chandler-Temple, A. F., Cool, S M and Trau, M (2006). Tailoring poly(3-hydroxybutyrate-co-3-hydroxyvalerate) for bone tissue engineering. 28th Australasian Polymer Symposium & Aust Society for Biomat, Rotorua, 5-9 Feb, 2006.

Poly(beta-hydroxybutyrate-co-beta-hydroxyvalerate) supports in vitro osteogenesis

Kumarasuriyar, A., Jackson, R. A., Grondahl, L., Trau, M., Nurcombe, V. and Cool, S. M. (2005). Poly(beta-hydroxybutyrate-co-beta-hydroxyvalerate) supports in vitro osteogenesis. New Rochelle: Mary Ann Liebert Inc. doi: 10.1089/ten.2005.11.1281

Response of osteoblast cells to the surface properties of Poly(3-hydroxybutyrate-co-hydroxyvalerate) PHBV

Keen, I., Raggatt, L., Cool, S. M., Nurcombe, V., Fredericks, P., Trau, M. and Grondahl, L. (2005). Response of osteoblast cells to the surface properties of Poly(3-hydroxybutyrate-co-hydroxyvalerate) PHBV. 2nd ARC Centre For Functional Nanomaterials Annual Conference, Maroochydore, Nov, 2005.

Development and in vitro testing of a biodegradable bone scaffold

Grondahl, L., Lutton, C. J., Kenny, B., Cool, S. M., Cassady, A.I. and Trau, M. (2004). Development and in vitro testing of a biodegradable bone scaffold. 7th World Biomaterials Congress, Sydney, May, 2004.

In vitro analysis of a bioactive, biodegradable material for bone repair

Kumarasuriyar, A., Jackson, R., Grondahl, L., Trau, M., Nurcombe, V. and Cool, S. M. (2004). In vitro analysis of a bioactive, biodegradable material for bone repair. 7th World Biomaterials Congress, Sydney, May, 2004.

Influence of solvent on the surface properties of PHBV solvent cast films

Keen, I., Grondahl, L., Raggatt, L., Fredericks, P.M., Nurcombe, V., Trau, M. and Cool, S. M. (2004). Influence of solvent on the surface properties of PHBV solvent cast films. 27th Australasian Polymer Symposium, Adelaide, Nov, 2004.

Surface modification of PHBV for bone tissue engineering

Keen, I., Grondahl, L., Cool, S. M., Nurcombe, V. and Trau, M. (2004). Surface modification of PHBV for bone tissue engineering. 7th World Biomaterials Congress, Sydney, May, 2004.

Biodegradable polyester materials: Uses in bone regeneration

Grondahl, L., Chandler-Temple, A. F., Luong-Van, E. K., Riding, A. S., Kumarasuriyar, A., Kenny, B., Cool, S. M., Nurcombe, V., Whittaker, A. K., Cassady, I.A. and Trau, M. (2003). Biodegradable polyester materials: Uses in bone regeneration. 26th Australian Polymer Conference, Noosa, July, 2003.

Surface modification for PHBV for enhanced biocompatibility

Chandler-Temple, A. F., Grondahl, L., Trau, M., Cool, S. M. and Nurcombe, V. (2003). Surface modification for PHBV for enhanced biocompatibility. 13th Annual Conference of Australian Society for Biomaterials, Brisbane, March, 2003.

To stick or not to stick: Surface modification of colloidal nanoparticles to control interparticle associations

Lawrie, G. A., Battersby, B. J., Grondahl, L., Tam, T., Lorentzen, M. and Trau, M. (2003). To stick or not to stick: Surface modification of colloidal nanoparticles to control interparticle associations. 11th International Conference on Surface & Colloid Science, Brazil, September, 2003.

Nanostructured biomaterials: a novel approach to artificial bone implants

Lutton, C, Read, J and Trau, M (2001). Nanostructured biomaterials: a novel approach to artificial bone implants. Australia: CSIRO Publishing. doi: 10.1071/CH01118

Field-induced two- and three-dimensional colloidal crystals

Trau, M., Saville, D. A. and Aksay, I. A. (1996). Field-induced two- and three-dimensional colloidal crystals. 1995 MRS Fall Meeting & Exhibit, Boston, MA, USA, 27 November-1 December, 1995. Washington, DC, United States: American Chemical Society.

Sensors. Special issue: "Biomarkers and Nanosensors: New Approaches for Biology and Medicine"

Sensors. Special issue: "Biomarkers and Nanosensors: New Approaches for Biology and Medicine". (2012). 12 (SI 7)