The University of Queensland

Preventing diseases in fish by vaccination

Barnes, Andrew (2013). Preventing diseases in fish by vaccination. Aquaculture: farming aquatic animals and plants: second edition. (pp. 445-459) edited by John S. Lucas and Paul C. Southgate. Chichester, West Sussex, United Kingdom: John Wiley & Sons. doi: 10.1002/9781118687932.ch19

Enteric redmouth disease (ERM) (Yersinia ruckeri)

Barnes, Andrew C. (2011). Enteric redmouth disease (ERM) (Yersinia ruckeri). Fish diseases and disorders, volume 3: Viral, bacterial and fungal infections. (pp. 484-511) edited by Patrick T. K. Woo and David W. Bruno. Wallingford, Oxfordshire, United Kingdom: CABI. doi: 10.1079/9781845935542.0484

Development of vaccines and management of viral diseases of crustaceans

Van Hulten, M., Johnson, K.N. and Barnes, A.C. (2009). Development of vaccines and management of viral diseases of crustaceans. Shellfish Safety and Quality. (pp. 359-383) edited by Sandra Shumway and Gary E. Rodrick. Cambridge, United Kingdom: Woodhead Publishing . doi: 10.1533/9781845695576.3.359

Bacteria Diseases of Fish- Where Do we go to From Here

Barnes, A. C. and Ellis, A. E. (2004). Bacteria Diseases of Fish- Where Do we go to From Here. Current Trends in the study of Bacterial and Viral Fish and Shrimp Diseases. (pp. 1-38) edited by Ka Yin Yueng. River Edge, New Jersey: World Publishing Group.

Serological and molecular typing of Tenacibaculum maritimum from New Zealand farmed salmon, Oncorhynchus tshawytscha

Kumanan, Karthiga, Delisle, Lizenn, Angelucci, Connie, Hunter, Ryan B.J., Rudenko, Oleksandra, Carson, Jeremy, Morrison, Richard N., Barnes, Andrew C. and Hutson, Kate S. (2024). Serological and molecular typing of Tenacibaculum maritimum from New Zealand farmed salmon, Oncorhynchus tshawytscha. Aquaculture, 578 740055, 740055. doi: 10.1016/j.aquaculture.2023.740055

Transforming the untransformable with knockout minicircles: High‐efficiency transformation and vector‐free allelic exchange knockout in the fish pathogen <i>Photobacterium damselae</i>

Rudenko, Oleksandra, Baseggio, Laura, McGuigan, Fynn and Barnes, Andrew C. (2023). Transforming the untransformable with knockout minicircles: High‐efficiency transformation and vector‐free allelic exchange knockout in the fish pathogen Photobacterium damselae. MicrobiologyOpen, 12 (4) e1374, e1374. doi: 10.1002/mbo3.1374

Biolayer interferometry is insufficiently sensitive for direct measurement of IgM quantity and avidity in Atlantic salmon (Salmo salar) serum

English, Chloe J., Li, Angus and Barnes, Andrew C. (2023). Biolayer interferometry is insufficiently sensitive for direct measurement of IgM quantity and avidity in Atlantic salmon (Salmo salar) serum. Fish and Shellfish Immunology, 134 108603, 108603. doi: 10.1016/j.fsi.2023.108603

From the basics to emerging diagnostic technologies: what is on the horizon for tilapia disease diagnostics?

Dong, Ha Thanh, Chaijarasphong, Thawatchai, Barnes, Andrew C., Delamare‐Deboutteville, Jérôme, Lee, Peiyu Alison, Senapin, Saengchan, Mohan, Chadag Vishnumurthy, Tang, Kathy F. J., McGladdery, Sharon E. and Bondad‐Reantaso, Melba G. (2023). From the basics to emerging diagnostic technologies: what is on the horizon for tilapia disease diagnostics?. Reviews in Aquaculture, 15 (S1), 186-212. doi: 10.1111/raq.12734

Creating value from purple phototrophic bacteria via single-cell protein production

Hülsen, Tim, Barnes, Andrew C., Batstone, Damien J. and Capson-Tojo, Gabriel (2022). Creating value from purple phototrophic bacteria via single-cell protein production. Current Opinion in Biotechnology, 76 102726, 102726. doi: 10.1016/j.copbio.2022.102726

The evolution of a specialized, highly virulent fish pathogen through gene loss and acquisition of host-specific survival mechanisms

Baseggio, Laura, Rudenko, Oleksandra, Engelstädter, Jan and Barnes, Andrew C. (2022). The evolution of a specialized, highly virulent fish pathogen through gene loss and acquisition of host-specific survival mechanisms. Applied and Environmental Microbiology, 88 (14) e0022222, 1-19. doi: 10.1128/aem.00222-22

A high-quality reference genome for the fish pathogen Streptococcus iniae

Alsheikh-Hussain, Areej S., Ben Zakour, Nouri L., Forde, Brian M., Rudenko, Oleksandra, Barnes, Andrew C. and Beatson, Scott A. (2022). A high-quality reference genome for the fish pathogen Streptococcus iniae. Microbial Genomics, 8 (3) 000777. doi: 10.1099/mgen.0.000777

Biodiversity of the intestinal microbiota of black tiger prawn, Penaeus monodon, increases with age and is only transiently impacted by major ingredient replacement in the diet

Kawasaki, Minami, Lo, Ting Him Wallace, Lazzarotto, Viviana, Briggs, Matthew, Smullen, Richard P. and Barnes, Andrew C. (2022). Biodiversity of the intestinal microbiota of black tiger prawn, Penaeus monodon, increases with age and is only transiently impacted by major ingredient replacement in the diet. Aquaculture Reports, 22 100948, 100948. doi: 10.1016/j.aqrep.2021.100948

Longitudinal field survey during deployment of an emergency autogenous vaccine against Betanodavirus in farmed giant grouper (Epinephelus lanceolatus): Multiple factors contribute to outbreaks and survival

Thwaite, Rosemary, Li, Angus, Kawasaki, Minami, Lin, Chun-han, Stephens, Fran, Cherrie, Brad, Knuckey, Richard, Landos, Matt and Barnes, Andrew C. (2022). Longitudinal field survey during deployment of an emergency autogenous vaccine against Betanodavirus in farmed giant grouper (Epinephelus lanceolatus): Multiple factors contribute to outbreaks and survival. Aquaculture, 548 737599, 1-13. doi: 10.1016/j.aquaculture.2021.737599

Acidified fish feeds reduce the energetic and physiological costs of digestion in juvenile barramundi (Lates calcarifer)

Goodrich, Harriet R., Wilson, Rod W., Smullen, Richard, Barnes, Andrew C. and Franklin, Craig E. (2022). Acidified fish feeds reduce the energetic and physiological costs of digestion in juvenile barramundi (Lates calcarifer). Aquaculture, 546 737400, 737400. doi: 10.1016/j.aquaculture.2021.737400

A single-step, high throughput, and highly reproducible method for measuring IgM quantity and avidity directly from fish serum via biolayer interferometry (BLI)

Li, Angus, Harris, Richard J., Fry, Bryan G. and Barnes, Andrew C. (2021). A single-step, high throughput, and highly reproducible method for measuring IgM quantity and avidity directly from fish serum via biolayer interferometry (BLI). Fish and Shellfish Immunology, 119, 231-237. doi: 10.1016/j.fsi.2021.10.003

Autogenous vaccination in aquaculture: a locally enabled solution towards reduction of the global antimicrobial resistance problem

Barnes, Andrew C., Rudenko, Oleksandra, Landos, Matt, Dong, Ha Thanh, Lusiastuti, Angela, Phuoc, Le Hong and Delamare‐Deboutteville, Jerome (2021). Autogenous vaccination in aquaculture: a locally enabled solution towards reduction of the global antimicrobial resistance problem. Reviews in Aquaculture, 14 (2), 907-918. doi: 10.1111/raq.12633

Molecular investigation of recurrent Streptococcus iniae epizootics affecting coral reef fish on an oceanic island suggests at least two distinct emergence events

Irion, Solène, Silayeva, Oleksandra, Sweet, Michael, Chabanet, Pascale, Barnes, Andrew C., Tortosa, Pablo and Séré, Mathieu G. (2021). Molecular investigation of recurrent Streptococcus iniae epizootics affecting coral reef fish on an oceanic island suggests at least two distinct emergence events. Frontiers in Microbiology, 12 749734, 749734. doi: 10.3389/fmicb.2021.749734

Rapid genotyping of tilapia lake virus (TiLV) using Nanopore sequencing

Delamare‐Deboutteville, Jerome, Taengphu, Suwimon, Gan, Han Ming, Kayansamruaj, Pattanapon, Debnath, Partho Pratim, Barnes, Andrew, Wilkinson, Shaun, Kawasaki, Minami, Vishnumurthy Mohan, Chadag, Senapin, Saengchan and Dong, Ha Thanh (2021). Rapid genotyping of tilapia lake virus (TiLV) using Nanopore sequencing. Journal of Fish Diseases, 44 (10) jfd.13467, 1491-1502. doi: 10.1111/jfd.13467

Serum IgM heavy chain sub-isotypes and light chain variants revealed in giant grouper (Epinephelus lanceolatus) via protein A affinity purification, mass spectrometry and genome sequencing

Li, Angus, Thwaite, Rosemary, Kellie, Stuart and Barnes, Andrew C. (2021). Serum IgM heavy chain sub-isotypes and light chain variants revealed in giant grouper (Epinephelus lanceolatus) via protein A affinity purification, mass spectrometry and genome sequencing. Fish and Shellfish Immunology, 113, 42-50. doi: 10.1016/j.fsi.2021.03.014

Complete, closed and curated genome sequences of Photobacterium damselae subsp. piscicida isolates from Australia indicate mobilome-driven localized evolution and novel pathogenicity determinants

Baseggio, Laura, Rudenko, Oleksandra, Buller, Nicky, Landos, Matt, Englestädter, Jan and Barnes, Andrew C. (2021). Complete, closed and curated genome sequences of Photobacterium damselae subsp. piscicida isolates from Australia indicate mobilome-driven localized evolution and novel pathogenicity determinants. Microbial Genomics, 7 (4) 000562, 1-14. doi: 10.1099/mgen.0.000562

Immersion challenge of naïve Atlantic salmon with cultured Nolandella sp. and Pseudoparamoeba sp. did not increase the severity of Neoparamoeba perurans-induced amoebic gill disease (AGD)

English, Chloe J., Botwright, Natasha A., Adams, Mark B., Barnes, Andrew C., Wynne, James W., Lima, Paula C. and Cook, Mathew T. (2021). Immersion challenge of naïve Atlantic salmon with cultured Nolandella sp. and Pseudoparamoeba sp. did not increase the severity of Neoparamoeba perurans-induced amoebic gill disease (AGD). Journal of Fish Diseases, 44 (2) jfd.13319, 149-160. doi: 10.1111/jfd.13319

Evolutionary epidemiology of Streptococcus iniae: linking mutation rate dynamics with adaptation to novel immunological landscapes

Rudenko, Oleksandra, Engelstädter, Jan and Barnes, Andrew C. (2020). Evolutionary epidemiology of Streptococcus iniae: linking mutation rate dynamics with adaptation to novel immunological landscapes. Infection, Genetics and Evolution, 85 104435, 104435. doi: 10.1016/j.meegid.2020.104435

Polychaetes (Perinereis helleri) reared in sand beds filtering nutrients from shrimp (Penaeus monodon) culture ponds can transiently carry IHHNV

Liu, Siyi, Rao, Min, Cowley, Jeff A., Morgan, Jess A.T., Barnes, Andrew C. and Palmer, Paul J. (2020). Polychaetes (Perinereis helleri) reared in sand beds filtering nutrients from shrimp (Penaeus monodon) culture ponds can transiently carry IHHNV. Aquaculture, 528 735560, 735560. doi: 10.1016/j.aquaculture.2020.735560

Effect of dietary replacement of fishmeal with spent brewer’s yeast on growth performance of Asian seabass (Lates calcarifer) in Cambodia coastal aquaculture

Sorphea, Sen, Lundh, Torbjörn, Lindberg, Jan Erik, Da, Chau Thi, Barnes, Andrew C. and Kiessling, Anders (2019). Effect of dietary replacement of fishmeal with spent brewer’s yeast on growth performance of Asian seabass (Lates calcarifer) in Cambodia coastal aquaculture. Livestock Research for Rural Development, 31 (9), 1-5.

Leucocyte integrins, but neither caspases nor NLR inflammasome are associated with lipopolysaccharide recognition and response in barramundi (Lates calcarifer)

Zoccola, Emmanuelle, Kellie, Stuart and Barnes, Andrew C. (2019). Leucocyte integrins, but neither caspases nor NLR inflammasome are associated with lipopolysaccharide recognition and response in barramundi (Lates calcarifer). Fish & Shellfish Immunology, 91, 172-179. doi: 10.1016/j.fsi.2019.05.015

Mixed culture purple phototrophic bacteria is an effective fishmeal replacement in aquaculture

Delamare-Deboutteville, Jérôme, Batstone, Damien J., Kawasaki, Minami, Stegman, Samuel, Salini, Michael, Tabrett, Simon, Smullen, Richard, Barnes, Andrew C. and Hülsen, Tim (2019). Mixed culture purple phototrophic bacteria is an effective fishmeal replacement in aquaculture. Water Research X, 4 100031, 100031. doi: 10.1016/j.wroa.2019.100031

Interactions of head-kidney leucocytes from giant grouper, Epinephelus lanceolatus, with pathogenic Streptococcus agalactiae strains from marine and terrestrial origins

Delamare-Deboutteville, Jérôme, Kawasaki, Minami, Zoccola, Emmanuelle, Heath, Candice M., Bowater, Rachel O. and Barnes, Andrew C. (2019). Interactions of head-kidney leucocytes from giant grouper, Epinephelus lanceolatus, with pathogenic Streptococcus agalactiae strains from marine and terrestrial origins. Fish and Shellfish Immunology, 90, 250-263. doi: 10.1016/j.fsi.2019.04.058

Growth performance of fry and fingerling Asian Seabass (Lates calcarifer) from Cambodian brood stock reared at different salinities

Sorphea, Sen, Terai, Atsumu, Sreyrum, Pean, Lundh, Torbjörn, Barnes, Andrew C., Da, Chau Thi and Kiessling, Anders (2019). Growth performance of fry and fingerling Asian Seabass (Lates calcarifer) from Cambodian brood stock reared at different salinities. Livestock Research for Rural Development, 31 (3).

Antibiotic Use by Small-Scale Farmers for Freshwater Aquaculture in the Upper Mekong Delta, Vietnam

Ström, Gunilla Hallenberg, Björklund, Hanna, Barnes, Andrew C., Da, Chau Thi, Nhi, Nguyen Huu Yen, Lan, Trinh Thi, Magnusson, Ulf, Norman Haldén, Anna and Boqvist, Sofia (2019). Antibiotic Use by Small-Scale Farmers for Freshwater Aquaculture in the Upper Mekong Delta, Vietnam. Journal of Aquatic Animal Health, 31 (3), 290-298. doi: 10.1002/aah.10084

Prevalence of six amoeba species colonising the gills of farmed Atlantic salmon with amoebic gill disease (AGD) using qPCR

English, Chloe J., Swords, Fiona, Downes, Jamie K., Ruane, Neil M., Botwright, Natasha A., Taylor, Richard S., Barnes, Andrew C., Wynne, James W., Lima, Paula C. and Cook, Mathew T. (2019). Prevalence of six amoeba species colonising the gills of farmed Atlantic salmon with amoebic gill disease (AGD) using qPCR. Aquaculture Environment Interactions, 11, 405-415. doi: 10.3354/aei00325

A diversity of amoebae colonise the gills of farmed Atlantic salmon (Salmo salar) with amoebic gill disease (AGD)

English, Chloe J., Tyml, Tomáš, Botwright, Natasha A., Barnes, Andrew C., Wynne, James W., Lima, Paula C. and Cook, Mathew T. (2018). A diversity of amoebae colonise the gills of farmed Atlantic salmon (Salmo salar) with amoebic gill disease (AGD). European Journal of Protistology, 67, 27-45. doi: 10.1016/j.ejop.2018.10.003

A field survey of small scale cage and pond farming of asian seabass (Lates calcarifer) in Cambodia

Sorphea, Sen, Kiessling, Anders, Barnes, Andrew C., Da, Chau Thi, Lindberg, Jan Erik and Lundh, Torbjörn (2018). A field survey of small scale cage and pond farming of asian seabass (Lates calcarifer) in Cambodia. Livestock Research for Rural Development, 30 (7).

Microevolution of aquatic Streptococcus agalactiae ST-261 from Australia indicates dissemination via imported tilapia and ongoing adaptation to marine hosts or environment

Kawasaki, Minami, Delamare-Deboutteville, Jerome, Bowater, Rachel O, Walker, Mark J., Beatson, Scott, Ben Zakour, Nouri L. and Barnes, Andrew C. (2018). Microevolution of aquatic Streptococcus agalactiae ST-261 from Australia indicates dissemination via imported tilapia and ongoing adaptation to marine hosts or environment. Applied and Environmental Microbiology, 84 (16) e00859-18, AEM.00859-18. doi: 10.1128/aem.00859-18

Multi-Locus Variable number of tandem repeat Analysis (MLVA) of Yersinia ruckeri confirms the existence of host-specificity, geographic endemism and anthropogenic dissemination of virulent clones

Gulla, Snorre, Barnes, Andrew C., Welch, Timothy J., Romalde, Jesús L., Ryder, David, Ormsby, Michael J., Carson, Jeremy, Lagesen, Karin, Verner-Jeffreys, David W., Davies, Robert L and Colquhoun, Duncan J (2018). Multi-Locus Variable number of tandem repeat Analysis (MLVA) of Yersinia ruckeri confirms the existence of host-specificity, geographic endemism and anthropogenic dissemination of virulent clones. Applied and Environmental Microbiology, 84 (16) e00730-18, AEM.00730-18. doi: 10.1128/AEM.00730-18

Epizootics of Streptococcus agalactiae infection in captive rays from Queensland, Australia

Bowater, R. O., Dennis, M. M., Blyde, D., Stone, B., Barnes, A. C., Delamare-Deboutteville, J., Horton, M. A., White, M., Condon, K. and Jones, R. (2018). Epizootics of Streptococcus agalactiae infection in captive rays from Queensland, Australia. Journal of Fish Diseases, 41 (2), 223-232. doi: 10.1111/jfd.12701

Gibson Assembly facilitates bacterial allelic exchange mutagenesis

Rudenko, Oleksandra and Barnes, Andrew C. (2017). Gibson Assembly facilitates bacterial allelic exchange mutagenesis. Journal of Microbiological Methods, 144, 157-163. doi: 10.1016/j.mimet.2017.11.023

Immune transcriptome reveals the mincle C-type lectin receptor acts as a partial replacement for TLR4 in lipopolysaccharide-mediated inflammatory response in barramundi (Lates calcarifer)

Zoccola, Emmanuelle, Kellie, Stuart and Barnes, Andrew C. (2017). Immune transcriptome reveals the mincle C-type lectin receptor acts as a partial replacement for TLR4 in lipopolysaccharide-mediated inflammatory response in barramundi (Lates calcarifer). Molecular Immunology, 83, 33-45. doi: 10.1016/j.molimm.2017.01.010

Whole genome analysis of Yersinia ruckeri isolated over 27 years in Australia and New Zealand reveals geographical endemism over multiple lineages and recent evolution under host selection

Barnes, Andrew C., Delamare-Deboutteville, Jerome, Gudkovs, Nicholas, Brosnahan, Cara, Morrison, Richard and Carson, Jeremy (2016). Whole genome analysis of Yersinia ruckeri isolated over 27 years in Australia and New Zealand reveals geographical endemism over multiple lineages and recent evolution under host selection. Microbial Genomics, 2 (12) ARTN 000095, e000095. doi: 10.1099/mgen.0.000095

A reliable method for enrichment of neutrophils from peripheral blood in barramundi (Lates calcarifer)

Masterman, Kelly-Anne and Barnes, Andrew C. (2016). A reliable method for enrichment of neutrophils from peripheral blood in barramundi (Lates calcarifer). Fish and Shellfish Immunology, 58, 174-176. doi: 10.1016/j.fsi.2016.09.028

Transcriptome analysis of grey mullet (Mugil cephalus) after challenge with Lactococcus garvieae

Byadgi, Omkar, Chen, Yao-Chung, Barnes, Andrew C., Tsai, Ming-An, Wang, Pei-Chyi and Chen, Shih-Chu (2016). Transcriptome analysis of grey mullet (Mugil cephalus) after challenge with Lactococcus garvieae. Fish and Shellfish Immunology, 58, 593-603. doi: 10.1016/j.fsi.2016.10.006

Streptococcus iniae cpsG alters capsular carbohydrate composition and is a cause of serotype switching in vaccinated fish

Heath, Candice, Gillen, Christine M., Chrysanthopoulos, Panagiotis, Walker, Mark J. and Barnes, Andrew C. (2016). Streptococcus iniae cpsG alters capsular carbohydrate composition and is a cause of serotype switching in vaccinated fish. Veterinary Microbiology, 193, 116-124. doi: 10.1016/j.vetmic.2016.08.011

Vaccination against streptococcal infections in farmed fish

Barnes, Andrew C. and Rudenko, Oleksandra (2016). Vaccination against streptococcal infections in farmed fish. Microbiology Australia, 37 (3), 118-121. doi: 10.1071/MA16040

Canopy venom: proteomic comparison among new world arboreal pit-viper venoms

Debono, Jordan, Cochran, Chip, Kuruppu, Sanjaya, Nouwens, Amanda, Rajapakse, Niwanthi W., Kawasaki, Minami, Wood, Kelly, Dobson, James, Baumann, Kate, Jouiaei, Mahdokht, Jackson, Timothy N. W., Koludarov, Ivan, Low, Dolyce, Ali, Syed A., Smith, A. Ian, Barnes, Andrew and Fry, Bryan G. (2016). Canopy venom: proteomic comparison among new world arboreal pit-viper venoms. Toxins, 8 (7) 210, 210.1-210.19. doi: 10.3390/toxins8070210

Identification of barramundi (Lates calcarifer) DC-SCRIPT, a specific molecular marker for dendritic cells in fish

Zoccola, Emmanuelle, Delamare-Deboutteville, Jerome and Barnes, Andrew C. (2015). Identification of barramundi (Lates calcarifer) DC-SCRIPT, a specific molecular marker for dendritic cells in fish. PLoS ONE, 10 (7) e0132687, 1-25. doi: 10.1371/journal.pone.0132687

Resistance of Black-lip learl oyster, Pinctada margaritifera, to infection by Ostreid herpes virus 1(mu)var under experimental challenge may be mediated by humoral antiviral activity

Tan, Terence L. S., Paul-Pont, Ika, Evans, Olivia M., Watterson, Daniel, Young, Paul, Whittington, Richard, Fougerouse, Angelique, Bichet, Hervé, Barnes, Andrew C. and Dang, Cécile (2015). Resistance of Black-lip learl oyster, Pinctada margaritifera, to infection by Ostreid herpes virus 1(mu)var under experimental challenge may be mediated by humoral antiviral activity. Fish and Shellfish Immunology, 44 (1), 232-240. doi: 10.1016/j.fsi.2015.02.026

Parental contribution to progeny during experimental spawning of jungle perch, Kuhlia rupestris

Hoskin, M. L., Hutchison, M. J., Barnes, A. C., Ovenden, J. R. and Pope, L. C. (2014). Parental contribution to progeny during experimental spawning of jungle perch, Kuhlia rupestris. Marine and Freshwater Research, 66 (4), 375-380. doi: 10.1071/MF13313

Infection and pathology in Queensland grouper, Epinephelus lanceolatus, (Bloch), caused by exposure to Streptococcus agalactiae via different routes

Delamare-Deboutteville, J., Bowater, R., Condon, K., Reynolds, A., Fisk, A., Aviles, F. and Barnes, A. C. (2014). Infection and pathology in Queensland grouper, Epinephelus lanceolatus, (Bloch), caused by exposure to Streptococcus agalactiae via different routes. Journal of Fish Diseases, 38 (12), 1021-1035. doi: 10.1111/jfd.12273

Characteristics of cyprinid herpesvirus 3 in different phases of infection: implications for disease transmission and control

Sunarto, Agus, McColl, Kenneth A., Crane, Mark St. J., Schat, Karel A., Slobedman, Barry, Barnes, Andrew C. and Walker, Peter J. (2014). Characteristics of cyprinid herpesvirus 3 in different phases of infection: implications for disease transmission and control. Virus Research, 188, 45-53. doi: 10.1016/j.virusres.2014.03.024

Dietary soybean protein concentrate-induced intestinal disorder in marine farmed Atlantic salmon, Salmo salar is associated with alterations in gut microbiota

Green, Timothy J., Smullen, Richard and Barnes, Andrew C. (2013). Dietary soybean protein concentrate-induced intestinal disorder in marine farmed Atlantic salmon, Salmo salar is associated with alterations in gut microbiota. Veterinary Microbiology, 166 (1-2), 286-292. doi: 10.1016/j.vetmic.2013.05.009

Effect of a hemiuroid trematode on the hemocyte immune parameters of the cockle Anadara trapezia

Dang, Cécile, Cribb, Thomas H., Osborne, Geoffrey, Kawasaki, Minami, Bedin, Anne-Sophie and Barnes, Andrew C. (2013). Effect of a hemiuroid trematode on the hemocyte immune parameters of the cockle Anadara trapezia. Fish and Shellfish Immunology, 35 (3), 951-956. doi: 10.1016/j.fsi.2013.07.010

The purine nucleotides guanine, adenine and inosine are a dietary requirement for optimal growth of black tiger prawn, P. monodon

Hoang Do Huu, Tabrett, Simon, Hoffmann, Klaus, Koeppel, Peter and Barnes, Andrew C. (2013). The purine nucleotides guanine, adenine and inosine are a dietary requirement for optimal growth of black tiger prawn, P. monodon. Aquaculture, 408-409, 100-105. doi: 10.1016/j.aquaculture.2013.05.023

Parasites of QX-resistant and wild-type Sydney rock oysters (Saccostrea glomerata) in Moreton Bay, SE Queensland, Australia: Diversity and host response

Dang, Cecile, Cribb, Thomas H., Cutmore, Scott C., Chan, Janlin, Henault, Olivier and Barnes, Andrew C. (2013). Parasites of QX-resistant and wild-type Sydney rock oysters (Saccostrea glomerata) in Moreton Bay, SE Queensland, Australia: Diversity and host response. Journal of Invertebrate Pathology, 112 (3), 273-277. doi: 10.1016/j.jip.2012.12.006

The conserved surface M-protein SiMA of Streptococcus iniae is not effective as a cross-protective vaccine against differing capsular serotypes in farmed fish

Aviles, Fabian, Zhang, Meiman May, Chan, Janlin, Delamare-Deboutteville, Jerome, Green, Timothy J., Dang, Cecile and Barnes, Andrew C. (2013). The conserved surface M-protein SiMA of Streptococcus iniae is not effective as a cross-protective vaccine against differing capsular serotypes in farmed fish. Veterinary Microbiology, 162 (1), 151-159. doi: 10.1016/j.vetmic.2012.08.018

Hemiuroid trematode sporocysts are undetected by hemocytes of their intermediate host, the ark cockle Anadara trapezia: potential role of surface carbohydrates in successful parasitism

Kawasaki, Minami, Delamare-Deboutteville, Jerome, Dang, Cecile and Barnes, Andrew C. (2013). Hemiuroid trematode sporocysts are undetected by hemocytes of their intermediate host, the ark cockle Anadara trapezia: potential role of surface carbohydrates in successful parasitism. Fish and Shellfish Immunology, 35 (6), 1937-1947. doi: 10.1016/j.fsi.2013.09.040

Dietary nucleotides are semi-essential nutrients for optimal growth of black tiger shrimp (Penaeus monodon)

Do Huu, Hoang, Tabrett, Simon, Hoffmann, Klaus, Köppel, Peter, Lucas, John S. and Barnes, Andrew C. (2012). Dietary nucleotides are semi-essential nutrients for optimal growth of black tiger shrimp (Penaeus monodon). Aquaculture, 366-367, 115-121. doi: 10.1016/j.aquaculture.2012.09.007

Koi herpesvirus encodes and expresses a functional interleukin-10

Sunarto, Agus, Liongue, Clifford, McColl, Kenneth A., Adams, Mathew M., Bulach, Dieter, Crane, Mark St. J., Schat, Karel A., Slobedman, Barry, Barnes, Andrew C., Ward, Alister C. and Walker, Peter J. (2012). Koi herpesvirus encodes and expresses a functional interleukin-10. Journal of Virology, 86 (21), 11512-11520. doi: 10.1128/JVI.00957-12

Evolution of the capsular operon of Streptococcus iniae in response to vaccination

Millard, Candice M., Baiano, Justice C. F., Chan, Candy, Yuen, Benedict, Aviles, Fabian, Landos, Matt, Chong, Roger S. M., Benedict, Suresh and Barnes, Andrew C. (2012). Evolution of the capsular operon of Streptococcus iniae in response to vaccination. Applied & Environmental Microbiology, 78 (23), 8219-8226. doi: 10.1128/AEM.02216-12

Genetic analysis of Black Tiger shrimp (Penaeus monodon) across its natural distribution range reveals more recent colonization of Fiji and other South Pacific islands

Waqairatu, Salote S., Dierens, Leanne, Cowley, Jeff A., Dixon, Tom J., Johnson, Karyn N., Barnes, Andrew C. and Li, Yutao (2012). Genetic analysis of Black Tiger shrimp (Penaeus monodon) across its natural distribution range reveals more recent colonization of Fiji and other South Pacific islands. Ecology and Evolution, 2 (8), 2057-2071. doi: 10.1002/ece3.316

Gender differences in hemocyte immune parameters of bivalves: The Sydney rock oyster Saccostrea glomerata and the pearl oyster Pinctada fucata

Dang, Cecile, Tan, Terence, Moffit, Dylan, Deboutteville, Jerome and Barnes, Andrew C. (2012). Gender differences in hemocyte immune parameters of bivalves: The Sydney rock oyster Saccostrea glomerata and the pearl oyster Pinctada fucata. Fish and Shellfish Immunology, 33 (1), 138-142. doi: 10.1016/j.fsi.2012.04.007

Regulation of bacterial communities through antimicrobial activity by the coral holobiont

Kvennefors, E. Charlotte E., Sampayo, Eugenia, Kerr, Caroline, Vieira, Genyess, Roff, George and Barnes, Andrew C. (2012). Regulation of bacterial communities through antimicrobial activity by the coral holobiont. Microbial Ecology, 63 (3), 605-618. doi: 10.1007/s00248-011-9946-0

Sediment bacteria and archaea community analysis and nutrient fluxes in a sub-tropical polymictic reservoir

Green, Timothy J., Barnes, Andrew C., Bartkow, Michael, Gale, Deb and Grinham, Alistair (2012). Sediment bacteria and archaea community analysis and nutrient fluxes in a sub-tropical polymictic reservoir. Aquatic Microbial Ecology, 65 (3) A2, 287-302. doi: 10.3354/ame01549

Tank color increases growth, and alters color preference and spectral sensitivity, in barramundi (Lates calcarifer)

Ullmann, Jeremy F. P., Gallagher, Tom, Hart, Nathan S., Barnes, Andrew, Smullen, Richard P., Collin, Shaun P. and Temple, Shelby E. (2011). Tank color increases growth, and alters color preference and spectral sensitivity, in barramundi (Lates calcarifer). Aquaculture, 322-323, 235-240. doi: 10.1016/j.aquaculture.2011.10.005

Immune parameters of QX-resistant and wild caught Saccostrea glomerata hemocytes in relation to Marteilia sydneyi infection

Dang, Cécile, Lambert, Christophe, Soudant, Philippe, Delamare-Deboutteville, Jérome, Zhang, May M., Chan, Janlin, Green, Timothy J., Le Goïc, Nelly and Barnes, Andrew C. (2011). Immune parameters of QX-resistant and wild caught Saccostrea glomerata hemocytes in relation to Marteilia sydneyi infection. Fish and Shellfish Immunology, 31 (6), 1034-1040. doi: 10.1016/j.fsi.2011.09.003

Two hepcidin-like antimicrobial peptides in Barramundi Lates calcarifer exhibit differing tissue tropism and are induced in response to lipopolysaccharide

Barnes, Andrew C., Trewin, Brendan, Snape, Natale, Kvennefors, E. Charlotte E. and Baiano, Justice C. F. (2011). Two hepcidin-like antimicrobial peptides in Barramundi Lates calcarifer exhibit differing tissue tropism and are induced in response to lipopolysaccharide. Fish and Shellfish Immunology, 31 (2), 350-357. doi: 10.1016/j.fsi.2011.05.027

Disease prevention strategies for QX disease (Marteilia sydneyi) of Sydney rock oysters (Saccostrea glomerata)

Green, Timothy J., Raftos, David, O'Connor, Wayne, Adlard, Robert D. and Barnes, Andrew C. (2011). Disease prevention strategies for QX disease (Marteilia sydneyi) of Sydney rock oysters (Saccostrea glomerata). The Journal of Shellfish Research, 30 (1), 47-53. doi: 10.2983/035.030.0108

Isolation and characterization of koi herpesvirus (KHV) from Indonesia: identification of a new genetic lineage

Sunarto, A., McColl, K.A., Crane, M.S., Sumiati, T., Hyatt, A.D., Barnes, A.C and Walker, P.J. (2011). Isolation and characterization of koi herpesvirus (KHV) from Indonesia: identification of a new genetic lineage. Journal of Fish Diseases, 34 (2), 87-101. doi: 10.1111/j.1365-2761.2010.01216.x

Analysis of evolutionarily conserved innate immune components in coral links immunity and symbiosis

Kvennefors, E. Charlotte E., Leggat, William, Kerr, Caroline C., Ainsworth, Tracy D., Hoegh-Guldberg, Ove and Barnes, Andrew C. (2010). Analysis of evolutionarily conserved innate immune components in coral links immunity and symbiosis. Developmental and Comparative Immunology, 34 (11), 1219-1229. doi: 10.1016/j.dci.2010.06.016

Gill-associated virus and recombinant protein vaccination in Penaeus monodon

Underwood, Darren J., Cowley, Jeff A., Sellars, Melony J., Barnes, Andrew C., van Hulten, Marielle C. W. and Johnson, Karyn N. (2010). Gill-associated virus and recombinant protein vaccination in Penaeus monodon. Aquaculture, 308 (3-4), 82-88. doi: 10.1016/j.aquaculture.2010.08.027

Bacterial diversity of the digestive gland of Sydney rock oysters, Saccostrea glomerata infected with the paramyxean parasite, Marteilia sydneyi

Green, Tim and Barnes, Andrew (2010). Bacterial diversity of the digestive gland of Sydney rock oysters, Saccostrea glomerata infected with the paramyxean parasite, Marteilia sydneyi. Journal of Applied Microbiology, 109 (2), 613-622. doi: 10.1111/j.1365-2672.2010.04687.x

Bacterial communities of two ubiquitous Great Barrier Reef corals reveals both site- and species-specificity of common bacterial associates

Kvennefors, E. Charlotte E., Sampayo, Eugenia, Ridgway, Tyrone, Barnes, Andrew Cartner and Hoegh-Guldberg, Ove (2010). Bacterial communities of two ubiquitous Great Barrier Reef corals reveals both site- and species-specificity of common bacterial associates. PLoS One, 5 (4) e10401, e10401 - 1-e10401 - 14. doi: 10.1371/journal.pone.0010401

Reduced salinity, but not estuarine acidification, is a cause of immune-suppression in the Sydney rock oyster Saccostrea glomerata

Green, Timothy J. and Barnes, Andrew C. (2010). Reduced salinity, but not estuarine acidification, is a cause of immune-suppression in the Sydney rock oyster Saccostrea glomerata. Marine Ecology - Progress Series, 402, 161-170. doi: 10.3354/meps08430

Single nucleotide polymorphisms in the actin and crustacean hyperglycemic hormone genes and their correlation with individual growth performance in giant freshwater prawn Macrobrachium rosenbergii

Nguyen, MT, Barnes, AC, Mather, PB, Li, YT and Lyons, RE (2010). Single nucleotide polymorphisms in the actin and crustacean hyperglycemic hormone genes and their correlation with individual growth performance in giant freshwater prawn Macrobrachium rosenbergii. AQUACULTURE, 301 (1-4), 7-15. doi: 10.1016/j.aquaculture.2010.02.001

Estimates of strain additive and non-additive genetic effects for growth traits in a diallel cross of three strains of giant freshwater prawn (Macrobrachium rosenbergii) in Vietnam

Ngyen, Minh Thanh, Nguyen, Nguyen Hong, Ponzoni, Raul W., Vu, Nguyen Than, Barnes, Andrew C. and Mather, Peter B. (2010). Estimates of strain additive and non-additive genetic effects for growth traits in a diallel cross of three strains of giant freshwater prawn (Macrobrachium rosenbergii) in Vietnam. Aquaculture, 299 (1-4), 30-36. doi: 10.1016/j.aquaculture.2009.12.011

Isolation of a novel strain of Bacillus pumilus from penaeid shrimp that is inhibitory against marine pathogens.

Hill, JE, Baiano, JCF and Barnes, AC (2009). Isolation of a novel strain of Bacillus pumilus from penaeid shrimp that is inhibitory against marine pathogens.. JOURNAL OF FISH DISEASES, 32 (12), 1007-1016. doi: 10.1111/j.1365-2761.2009.01084.x

Towards Control of Streptococcus iniae

Baiano, JCF and Barnes, AC (2009). Towards Control of Streptococcus iniae. EMERGING INFECTIOUS DISEASES, 15 (12), 1891-1896. doi: 10.3201/eid1512.090232

Inhibitor of REL/NF-KB is regulated in Sydney rock oysters in response to specific double-stranded RNA and Vibrio alginolyticus, but the major immune anti-oxidants EcSOD and Prx6 are non-inducible

Green, Timothy and Barnes, Andrew (2009). Inhibitor of REL/NF-KB is regulated in Sydney rock oysters in response to specific double-stranded RNA and Vibrio alginolyticus, but the major immune anti-oxidants EcSOD and Prx6 are non-inducible. Fish and Shellfish Immunology, 27 (2), 260-265. doi: 10.1016/j.fsi.2009.05.005

Differing cell population structure reflects differing activity of Percoll-separated pronephros and peritoneal leucocytes from barramundi (Lates calcarifer)

Tumbol, RA, Baiano, JCF and Barnes, AC (2009). Differing cell population structure reflects differing activity of Percoll-separated pronephros and peritoneal leucocytes from barramundi (Lates calcarifer). AQUACULTURE, 292 (3-4), 180-188. doi: 10.1016/j.aquaculture.2009.04.030

Differential expression of genes encoding anti-oxidant enzymes in Sydney rock oysters, Saccostrea glomerata (Gould) selected for disease resistance

Green, Timothy J., Dixon, Tom J., Devic, Emilie, Adlard, Robert D. and Barnes, Andrew C. (2009). Differential expression of genes encoding anti-oxidant enzymes in Sydney rock oysters, Saccostrea glomerata (Gould) selected for disease resistance. Fish & Shellfish Immunology, 26 (5), 799-810. doi: 10.1016/j.fsi.2009.03.003

Host-Directed Evolution of a Novel Lactate Oxidase in Streptococcus iniae Isolates from Barramundi (Lates calcarifer)

Nawawi, RA, Baiano, JCF, Kvennefors, ECE and Barnes, AC (2009). Host-Directed Evolution of a Novel Lactate Oxidase in Streptococcus iniae Isolates from Barramundi (Lates calcarifer). APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 75 (9), 2908-2919. doi: 10.1128/AEM.02147-08

Linear and branched beta(1-3) D-glucans activate but do not prime teleost macrophages in vitro and are inactivated by dilute acid: Implications for dietary immunostimulation

Kudrenko, Ben, Snape, Natale and Barnes, Andrew C. (2009). Linear and branched beta(1-3) D-glucans activate but do not prime teleost macrophages in vitro and are inactivated by dilute acid: Implications for dietary immunostimulation. Fish and Shellfish Immunology, 26 (3), 443-450. doi: 10.1016/j.fsi.2009.01.009

Evaluation of growth performance in a diallel cross of three strains of giant freshwater prawn (Macrobrachium rosenbergii) in Vietnam

Thanh, NM, Ponzoni, RW, Nguyen, NH, Vu, NT, Barnes, A and Mather, PB (2009). Evaluation of growth performance in a diallel cross of three strains of giant freshwater prawn (Macrobrachium rosenbergii) in Vietnam. AQUACULTURE, 287 (1-2), 75-83. doi: 10.1016/j.aquaculture.2008.10.051

An ancient and variable mannose-binding lectin from the coral Acropora millepora binds both pathogens and symbionts

Kvennefors, E.Charlotte E., Leggat, William, Hoegh-Guldberg, Ove, Degnan, Bernard M. and Barnes, Andrew C. (2008). An ancient and variable mannose-binding lectin from the coral Acropora millepora binds both pathogens and symbionts. Developmental and Comparative Immunology, 32 (12), 1582-1592. doi: 10.1016/j.dci.2008.05.010

“Vaccination” of Shrimp Against Viral Pathogens: Phenomenology and Underlying Mechanisms

Johnson, K. N., van Hulten, M.C.W. and Barnes, A. C. (2008). “Vaccination” of Shrimp Against Viral Pathogens: Phenomenology and Underlying Mechanisms. Vaccine, 26 (38), 4885-4892. doi: 10.1016/j.vaccine.2008.07.019

Wildlife as reservoirs for parasites infecting commercial species: Host specificity and a redescription of Kudoa amamiensis from teleost fish in Australia

Burger, M. A. A., Barnes, A. C. and Adlard, R. D. (2008). Wildlife as reservoirs for parasites infecting commercial species: Host specificity and a redescription of Kudoa amamiensis from teleost fish in Australia. Journal of Fish Diseases, 31 (11), 835-844. doi: 10.1111/j.1365-2761.2008.00958.x

Parasites, pathological conditions and mortality in QX-resistant and wild-caught Sydney rock oysters, Saccostrea glomerata

Green, Timothy J., Jones, Brian J., Adlard, Robert D. and Barnes, Andrew C. (2008). Parasites, pathological conditions and mortality in QX-resistant and wild-caught Sydney rock oysters, Saccostrea glomerata. Aquaculture, 280 (1-4), 35-38. doi: 10.1016/j.aquaculture.2008.04.004

Identification and molecular characterisation of a fibrinogen binding protein from Streptococcus iniae

Baiano, Justice C. F., Tumbol, Reiny A., Umapathy, Aarti and Barnes, Andrew C. (2008). Identification and molecular characterisation of a fibrinogen binding protein from Streptococcus iniae. BMC Microbiology, 8 (1) 67, Article Number: 67. doi: 10.1186/1471-2180-8-67

Genetic variability amongst Streptococcus iniae isolates from Australia

Nawawi, R. A., Baiano, J. and Barnes, A. C. (2008). Genetic variability amongst Streptococcus iniae isolates from Australia. Journal of Fish Diseases, 31 (4), 305-309. doi: 10.1111/j.1365-2761.2007.00880.x

Microbial community analysis of water, foregut, and hindgut during growth of Pacific white shrimp, Litopenaeus vannamei, in closed-system aquaculture

Johnson, Crystal N., Barnes, Sue, Ogle, John, Grimes, D. Jay, Chang, Yun-Juan, Peacock, Aaron D. and Kline, Liz (2008). Microbial community analysis of water, foregut, and hindgut during growth of Pacific white shrimp, Litopenaeus vannamei, in closed-system aquaculture. Journal of the World Aquaculture Society, 39 (2), 251-258. doi: 10.1111/j.1749-7345.2008.00155.x

Streptococcus iniae: An aquatic pathogen of global veterinary significance and a challenging candidate for reliable vaccination

Agnew, Wendy and Barnes, Andrew C. (2007). Streptococcus iniae: An aquatic pathogen of global veterinary significance and a challenging candidate for reliable vaccination. Veterinary Microbiology, 122 (1-2), 1-15. doi: 10.1016/j.vetmic.2007.03.002

Aerosol dispersal of the fish pathogen, Amyloodinium ocellatum

Roberts-Thomson, A., Barnes, A., Stewart Fielder, D., Lester, R. J. G. and Adlard, R. D. (2006). Aerosol dispersal of the fish pathogen, Amyloodinium ocellatum. Aquaculture, 257 (1-4), 118-123. doi: 10.1016/j.aquaculture.2006.02.058

Response and function of cutaneous mucosal and serum antibodies in barramundi (Lates calcarifer) acclimated in seawater and freshwater

Delamare-Deboutteville,Jerome, Wood,Daniel and Barnes, Andrew C. (2006). Response and function of cutaneous mucosal and serum antibodies in barramundi (Lates calcarifer) acclimated in seawater and freshwater. Fish & Shellfish Immunology, 21 (1), 92-101. doi: 10.1016/j.fsi.2005.10.005

Iron acquisition mechanisms of Flavobacterium psychrophilum

Moller, J. D., Ellis, A. E., Barnes, A. C. and Dalsgaard, I. (2005). Iron acquisition mechanisms of Flavobacterium psychrophilum. Journal of FIsh Diseases, 28 (7), 391-398. doi: 10.1111/j.1365-2761.2005.00639.x

Characterisation of Surface Blebbing and Membrane Vesicles Produced by Flavobacterium Psychrophilum

Moller, Jeannette D., Barnes, Andrew C., Dalsgaard, Inger and Ellis, Anthony E. (2005). Characterisation of Surface Blebbing and Membrane Vesicles Produced by Flavobacterium Psychrophilum. Diseases of Aquatic Organisms, 64 (3), 201-209. doi: 10.3354/dao064201

Enhancing growth performance of shrimp with nucleotide supplemented diets

Ancieta-Probstl, D.K., Smullen, R. P. and Barnes, A. C. (2005). Enhancing growth performance of shrimp with nucleotide supplemented diets. Aquaculture Asiapacific, 1 (4), 26-28.

Role of capsule in serotypic differences and complement fixation by Lactococcus garvieae

Barnes, Andrew C. and Ellis, Anthony E. (2004). Role of capsule in serotypic differences and complement fixation by Lactococcus garvieae. Fish & Shellfish Immunology, 16 (2), 207-214. doi: 10.1016/S1050-4648(03)00079-2

Streptococcus iniae expresses a cell surface non-immune trout immunoglobulin-binding factor when grown in normal trout serum

Barnes, Andrew C., Horne, Michael T. and Ellis, Anthony E. (2003). Streptococcus iniae expresses a cell surface non-immune trout immunoglobulin-binding factor when grown in normal trout serum. Fish & Shellfish Immunology, 15 (5), 425-431. doi: 10.1016/S1050-4648(03)00021-4

Pasteurellosis in Atlantic salmon, Salmo salar L.: Immunohistochemistry of the Naturally-Occurring Disease

Foyle, L., Turnbull, T., Ellis, A., Barnes, A., Adams, A. and Ferguson, H. W. (2003). Pasteurellosis in Atlantic salmon, Salmo salar L.: Immunohistochemistry of the Naturally-Occurring Disease. Journal of Fish Diseases, 26 (6), 373-376. doi: 10.1046/j.1365-2761.2003.00465.x

Streptococcus Iniae: Serological Differences, Presence of Capsule and Resistance to Immune Serum Killing

Barnes, Andrew C., Young, Fiona M., Horne, Michael T. and Ellis, Anthony E. (2003). Streptococcus Iniae: Serological Differences, Presence of Capsule and Resistance to Immune Serum Killing. Diseases of Aquatic Organisms, 53 (3), 241-247. doi: 10.3354/dao053241

Variation in arginine dihydrolase activity in Streptococcus iniae may be an artefact of the assay

Barnes, A. C. and Ellis, A. E. (2003). Variation in arginine dihydrolase activity in Streptococcus iniae may be an artefact of the assay. Bulletin of The European Association of Fish Pathologists, 23 (4), 163-166.

Antibody increases phagocytosis and killing of Lactococcus garvieae by rainbow trout (Oncorhynchus mykiss, L.) macrophages

Barnes, Andrew C., Guyot, Céline, Hansen, Bjarne G., Horne, Michael T. and Ellis, Anthony E. (2002). Antibody increases phagocytosis and killing of Lactococcus garvieae by rainbow trout (Oncorhynchus mykiss, L.) macrophages. Fish & Shellfish Immunology, 12 (2), 181-186. doi: 10.1006/fsim.2001.0372

Resistance to serum killing may contribute to differences in the abilities of capsulate and non-capsulated isolates of Lactococcus garvieae to cause disease in rainbow trout (Oncorhynchus mykiss L.)

Barnes, Andrew C., Guyot, Céline, Hansen, Bjarne G., Mackenzie, Kevin, Horne, Michael T. and Ellis, Anthony E. (2002). Resistance to serum killing may contribute to differences in the abilities of capsulate and non-capsulated isolates of Lactococcus garvieae to cause disease in rainbow trout (Oncorhynchus mykiss L.). Fish & Shellfish Immunology, 12 (2), 155-168. doi: 10.1006/fsim.2001.0361

Resistance to serum killing may contribute to differences in the abilities of capsulate and non-capsulated isolates of lactococcus garvieae to cause disease in rainbow trout (Oncorhynchus mykiss L.)

Barnes, Andrew C., Guyot, Céline, Hansen, Bjarne G., Mackenzie, Kevin, Horne, Michael T and Ellis, Anthony E (2002). Resistance to serum killing may contribute to differences in the abilities of capsulate and non-capsulated isolates of lactococcus garvieae to cause disease in rainbow trout (Oncorhynchus mykiss L.). Fish and Shellfish Immunology, 12 (2), 155-68. doi: 10.1006/fsim.2001.0361

Welfare and Ethics in Fish Farming

Poppe, T., Barnes, A. C. and Midtlyng, P. J. (2002). Welfare and Ethics in Fish Farming. Bulletin of the European Association of Fish Pathologists, 22 (2), 148-152.

Kinetics of juvenile sea bass (Dicentrarchus labrax, L.) systemic and mucosal antibody secreting cell response to different antigens (Photobacterium damselae spp. piscicida, Vibrio anguillarum and DNP)

Dos Santos, Nuno M. S., Taverne-Thiele, J. J., Barnes, Andrew C., Ellis, Anthony E. and Rombout, Jan H. W. M. (2001). Kinetics of juvenile sea bass (Dicentrarchus labrax, L.) systemic and mucosal antibody secreting cell response to different antigens (Photobacterium damselae spp. piscicida, Vibrio anguillarum and DNP). Fish & Shellfish Immunology, 11 (4), 317-331. doi: 10.1006/fsim.2000.0320

The gill is a major organ for antibody secreting cell production following direct immersion of sea bass (Dicentrarchus labrax, L.) in a Photobacterium damselae ssp piscicida bacterin: an ontogenetic study

Dos Santos, Nuno M. S., Taverne-Thiele, J. J., Barnes, Andy C., van Muiswinkel, Willem B., Ellis, Anthony E. and Rombout, Jan H. W. M. (2001). The gill is a major organ for antibody secreting cell production following direct immersion of sea bass (Dicentrarchus labrax, L.) in a Photobacterium damselae ssp piscicida bacterin: an ontogenetic study. Fish & Shellfish Immunology, 11 (1), 65-74. doi: 10.1006/fsim.2000.0295

Invasion of fish epithelial cells by Photobacterium damselae subsp piscicida: evidence for receptor specificity, and effect of capsule and serum

Lopez-Doriga, MV, Barnes, AC, dos Santos, NMS and Ellis, AE (2000). Invasion of fish epithelial cells by Photobacterium damselae subsp piscicida: evidence for receptor specificity, and effect of capsule and serum. Microbiology-Uk, 146 (1), 21-30. doi: 10.1099/00221287-146-1-21

Peroxide-inducible catalase in Aeromonas salmonicida subsp salmonicida protects against exogenous hydrogen peroxide and killing by activated rainbow trout, Oncorhynchus mykiss L, macrophages

Barnes, AC, Bowden, TJ, Horne, MT and Ellis, AE (1999). Peroxide-inducible catalase in Aeromonas salmonicida subsp salmonicida protects against exogenous hydrogen peroxide and killing by activated rainbow trout, Oncorhynchus mykiss L, macrophages. Microbial Pathogenesis, 26 (3), 149-158. doi: 10.1006/mpat.1998.0260

Superoxide dismutase and catalase in Photobacterium damselae subsp. piscicida and their roles in resistance to reactive oxygen species

Barnes, AC, Balebona, MC, Horne, MT and Ellis, AE (1999). Superoxide dismutase and catalase in Photobacterium damselae subsp. piscicida and their roles in resistance to reactive oxygen species. Microbiology-Uk, 145, 483-494.

Effect of iron on expression of superoxide dismutase by Aeromonas salmonicida and associated resistance to superoxide anion

Barnes, AC, Horne, MT and Ellis, AE (1996). Effect of iron on expression of superoxide dismutase by Aeromonas salmonicida and associated resistance to superoxide anion. Fems Microbiology Letters, 142 (1), 19-26. doi: 10.1111/j.1574-6968.1996.tb08401.x

Aquaculture Antibacterials Are Antagonized by Seawater Cations

Barnes, AC, Hastings, TS and Amyes, Sgb (1995). Aquaculture Antibacterials Are Antagonized by Seawater Cations. Journal of Fish Diseases, 18 (5), 463-465. doi: 10.1111/j.1365-2761.1995.tb00338.x

Amoxicillin Resistance in Scottish Isolates of Aeromonas-Salmonicida

Barnes, AC, Hastings, TS and Amyes, GB (1994). Amoxicillin Resistance in Scottish Isolates of Aeromonas-Salmonicida. Journal of Fish Diseases, 17 (4), 357-363. doi: 10.1111/j.1365-2761.1994.tb00231.x

Alterations in Outer-Membrane Proteins Identified in a Clinical Isolate of Aeromonas-Salmonicida Subsp Salmonicida

Barnes, AC, Lewin, CS, Hastings, TS and Amyes, Sgb (1992). Alterations in Outer-Membrane Proteins Identified in a Clinical Isolate of Aeromonas-Salmonicida Subsp Salmonicida. Journal of Fish Diseases, 15 (3), 279-282. doi: 10.1111/j.1365-2761.1992.tb00665.x

Invitro Susceptibility of the Fish Pathogen Aeromonas-Salmonicida to Flumequine

Barnes, AC, Lewin, CS, Hastings, TS and Amyes, Sgb (1991). Invitro Susceptibility of the Fish Pathogen Aeromonas-Salmonicida to Flumequine. Antimicrobial Agents and Chemotherapy, 35 (12), 2634-2635. doi: 10.1128/aac.35.12.2634

Fluoroquinolones Display Rapid Bactericidal Activity and Low Mutation Frequencies Against Aeromonas-Salmonicida

Barnes, AC, Amyes, Sgb, Hastings, TS and Lewin, CS (1991). Fluoroquinolones Display Rapid Bactericidal Activity and Low Mutation Frequencies Against Aeromonas-Salmonicida. Journal of Fish Diseases, 14 (6), 661-667. doi: 10.1111/j.1365-2761.1991.tb00624.x

Cross Resistance Between Oxytetracycline and Oxolinic Acid in Aeromonas-Salmonicida Associated with Alterations in Outer-Membrane Proteins

Barnes, AC, Lewin, CS, Hastings, TS and Amyes, Sgb (1990). Cross Resistance Between Oxytetracycline and Oxolinic Acid in Aeromonas-Salmonicida Associated with Alterations in Outer-Membrane Proteins. Fems Microbiology Letters, 72 (3), 337-339. doi: 10.1111/j.1574-6968.1990.tb03912.x

Cross resistance between oxytetracycline and oxolinic acid in Aeromonas salmonicida associated with alterations in outer membrane proteins

Barnes, A. C., Lewin, C. S., Hastings, T. S. and Amyes, S. G. (1990). Cross resistance between oxytetracycline and oxolinic acid in Aeromonas salmonicida associated with alterations in outer membrane proteins. FEMS microbiology letters, 60 (3), 337-9. doi: 10.1016/0378-1097(90)90327-m

Invitro Activities of 4-Quinolones Against the Fish Pathogen Aeromonas-Salmonicida

Barnes, AC, Lewin, CS, Hastings, TS and Amyes, Sgb (1990). Invitro Activities of 4-Quinolones Against the Fish Pathogen Aeromonas-Salmonicida. Antimicrobial Agents and Chemotherapy, 34 (9), 1819-1820. doi: 10.1128/aac.34.9.1819

Effect of In-Vitro Pesticide Exposure On Oxidative Burst Potential of Sydney Rock Oyster Hemocytes

Mackintosh, Katrina, Dang, Cecile, Barnes, Andrew and Green, Timothy (2011). Effect of In-Vitro Pesticide Exposure On Oxidative Burst Potential of Sydney Rock Oyster Hemocytes. 103rd Annual Meeting National Shellfisheries Association , Baltimore, Maryland, 27–31 March 2011. Hanover, PA United States: National Shellfisheries Association.

In-vitro pesticide exposure on the oxidative burst potential of Sydney rock oyster hemocytes

Mackintosh, Katrina, Dang, Cecile, Barnes, Andrew and Green, Timothy (2011). In-vitro pesticide exposure on the oxidative burst potential of Sydney rock oyster hemocytes. Australian College of Veterinary Scientists: Science Week Conference 2011, Gold Coast, Surfers Paradise, QLD, Australia, 30 June-2 July 2011.

Three-dimensional, high-resolution magnetic resonance imaging of the zebrafish brain

Ullmann, J. F. P., Cowin, G., Barnes, A. and Collin, S. P. (2009). Three-dimensional, high-resolution magnetic resonance imaging of the zebrafish brain. Society for Neuroscience 38th Annual meeting, Washington DC, United States, 15-19 November 2008.

Sensory Input to the CNS in Fishes: A New Quantitative Methodology Using Three-Dimensional Magnetic Resonance Imaging

Barnes, A., Collin, S. P, Cowin, G. and Ullmann, J F P (2007). Sensory Input to the CNS in Fishes: A New Quantitative Methodology Using Three-Dimensional Magnetic Resonance Imaging. Society for Neuroscience 2007, San Diego, 5 - 7 November 2007.

Update on bacterial vaccines: Photobacterium damselae subsp. piscicida

Barnes, A. C., Dos Santos, N. M. S and Ellis, A. E. (2005). Update on bacterial vaccines: Photobacterium damselae subsp. piscicida. 3rd International Symposium on Fish Vaccinology, Bergen Norway, Apr 09-11, 2003. Basel: Karger.

Managing velvet disease in marine fish hatcheries

Roberts-Thomson, A., Fielder, D., Barnes, A. C., Lester, R.J. and Adlard, R. D. (2004). Managing velvet disease in marine fish hatcheries. Australasian Aquaculture Conference, Sydney, Australia, 26-29 September 2004.

Bactericidal Activity of 4-Quinolones, Including Flumequine, Against Aeromonas-Salmonicida

Barnes, AC, Lewin, CS, Hastings, TS and Amyes, Sgb (1992). Bactericidal Activity of 4-Quinolones, Including Flumequine, Against Aeromonas-Salmonicida. Conf On Problems of Chemotherapy in Aquaculture : Theory to Reality, Paris France, Mar 12-15, 1991. PARIS: OFFICE INT EPIZOOTIES.

Vaccination for emergency and long-term control of Betanodavirus in Australian marine aquaculture

Thwaite, Rosemary, Kawasaki, Minami, Li, Angus, Condon, Kelly, Knuckey, Richard, Cherrie, Bradley, White, Mark, Landos, Matt and Barnes, Andrew C. (2023). Vaccination for emergency and long-term control of Betanodavirus in Australian marine aquaculture. Brisbane, Australia: The University of Queensland; Fisheries Research and Development Corporation. doi: 10.14264/1444c70