Dr Jason Dowling

Adjunct Associate Professor

School of Electrical Engineering and Computer Science
Faculty of Engineering, Architecture and Information Technology

Overview

Publications

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Publications

Book Chapter

  • Dowling, Jason, O'Connor, Laura, Acosta, Oscar, Raniga, Parnesh, de Crevoisier, Renaud, Nunes, Jean-Claude, Barateau, Anais, Chourak, Hilda, Choi, Jae Hyuk and Greer, Peter (2022). Image synthesis for MRI-only radiotherapy treatment planning. Biomedical image synthesis and simulation: methods and applications. (pp. 423-445) edited by Ninon Burgos and David Svoboda. London, United Kingdom: Academic Press/Elsevier. doi: 10.1016/B978-0-12-824349-7.00027-X

  • Dowling, Jason A. and Korhonen, Juha (2019). MR-Only Methodology. MRI for Radiotherapy: Planning, Delivery, and Response Assessment. (pp. 131-151) Cham, Switzerland: Springer. doi: 10.1007/978-3-030-14442-5_9

  • Acosta, Oscar, Dowling, Jason, Drean, Gael, Simon, Antoine, De Crevoisier, Renaud and Haigron, Pascal (2014). Multi-atlas-based segmentation of pelvic structures from ct scans for planning in prostate cancer radiotherapy. Abdomen and Thoracic Imaging: An Engineering and Clinical Perspective. (pp. 623-656) Boston, MA: Springer US. doi: 10.1007/978-1-4614-8498-1_24

  • Dowling, Jason, Boles, Wageeh and Maeder, Anthony (2008). Visual prostheses for the blind: A framework for information presentation. Mechatronics and Machine Vision in Practice. (pp. 275-287) Springer Berlin Heidelberg. doi: 10.1007/978-3-540-74027-8_24

Journal Article

Conference Publication

  • Liu, Siyu, Dowling, Jason A., Engstrom, Craig, Greer, Peter B., Crozier, Stuart and Chandra, Shekhar S. (2023). Manipulating medical image translation with manifold disentanglement. 2023 International Conference on Digital Image Computing: Techniques and Applications (DICTA), Port Macquarie, Australia, 28 November-1 December 2023. Piscataway, NJ, United States: Institute of Electrical and Electronics Engineers. doi: 10.1109/dicta60407.2023.00053

  • Leung, Sze-Nung, Dowling, Jason A., Fripp, Jurgen, Shen, Kai-Kai and Chandra, Shekhar S. (2023). Medical shape pattern analysis with MeshCNN. 20th IEEE International Symposium on Biomedical Imaging (ISBI), Cartagena, Colombia, 18-21 April 2023. Piscataway, NJ United States: Institute of Electrical and Electronics Engineers. doi: 10.1109/isbi53787.2023.10230427

  • Nicolson, Aaron, Dowling, Jason and Koopman, Bevan (2023). e-Health CSIRO at RadSum23: adapting a chest x-ray report generator to multimodal radiology report summarisation. 22nd Workshop on Biomedical Natural Language Processing and BioNLP Shared Tasks, BioNLP 2023, Toronto, Canada, 13 July 2023. Stroudsburg, PA United States: Association for Computational Linguistics. doi: 10.18653/v1/2023.bionlp-1.56

  • Lekieffre, P., Collot, E., Texier, B., Hémon, C., Tahri, S., Chourak, H., Bessieres, I., Greer, P., Dowling, J., Barateau, A., Lafond, C., de Crevoisier, R. and Nunes, J. (2023). 3D patch cycle-GAN-based MR-to-CT synthesis from monocenter and multicenter training. ESTRO 2023, Vienna, Austria, 13 - 16 May 2023. Shannon, Ireland: Elsevier. doi: 10.1016/s0167-8140(23)66586-7

  • Texier, B., Hémon, C., Collot, E., Lekieffre, P., Tahri, S., Chourak, H., Greer, P., Dowling, J., Barateau, A., Lafond, C., de Crevoisier, R., Castelli, J. and Nunes, J. (2023). Evaluation of prostate synthetic CTs from MRI using 2D cycle-GAN with multicentric learning. ESTRO 2023, Vienna, Austria, 13 - 16 May 2023. Shannon, Ireland: Elsevier. doi: 10.1016/s0167-8140(23)08618-8

  • White, J., Wadhawan, A., Min, H., Rabi, Y., Schmutz, B., Dowling, J., Tchernegovski, A., Bourgeat, P., Tetsworth, K., Fripp, J., Mitchell, G., Hacking, C., Williamson, F. and Schuetz, M. (2023). Distal radius fracture classification using deep learning algorithms. The New Zealand Orthopaedic Association and the Australian Orthopaedic Association (NZOA AOA) Combined Annual Scientific Meeting, Christchurch, New Zealand, 31 October – 3 November 2022. London, United Kingdom: British Editorial Society of Bone and Joint Surgery. doi: 10.1302/1358-992x.2023.2.102

  • Nicolson, Aaron, Dowling, Jason and Koopman, Bevan (2023). A Concise Model for Medical Image Captioning. CEUR-WS.

  • Lebrat, Leo, Nicolson, Aaron, Santa Cruz, Rodrigo, Belous, Gregg, Koopman, Bevan and Dowling, Jason (2022). CSIRO at ImageCLEFmedical Caption 2022. CLEF 2022 - Conference and Labs of the Evaluation Forum, Bologna, Italy, 5-8 September 2022. Aachen, Germany: Rheinisch-Westfaelische Technische Hochschule Aachen Lehrstuhl Informatik.

  • Xin, Bowen, Min, Hang, Gillman, Ashley G., Koopman, Bevan, Dowling, Jason and Nicolson, Aaron (2022). CSIRO at the ImageCLEFmed 2022 Tuberculosis Caverns Detection Challenge: A 2D and 3D deep learning detection network approach. CLEF 2022 - Conference and Labs of the Evaluation Forum, Bologna, Italy, 5-8 September 2022. Aachen, Germany: Rheinisch-Westfaelische Technische Hochschule Aachen Lehrstuhl Informatik.

  • Nicolson, Aaron, Dowling, Jason and Koopman, Bevan (2022). ImageCLEF 2021 Best of Labs: The curious case of caption generation for medical images. 13th International Conference of the CLEF Association, Bologna, Italy, 5-8 September 2022. Cham, Switzerland: Springer International Publishing. doi: 10.1007/978-3-031-13643-6_15

  • Otton, J., Finnegan, R. and Dowling, J. (2021). Quantification Of Cardiac Chamber Size From Chest CT: Application To COVID19. 16th Annual Scientific Meeting of the Society of Cardiovascular Computed Tomography, Online, 16 - 17 July 2021. Philadelphia, PA United States: Elsevier. doi: 10.1016/j.jcct.2021.06.216

  • Cruz, Rodrigo Santa, Lebrat, Leo, Bourgeat, Pierrick, Dore, Vincent, Dowling, Jason, Fripp, Jurgen, Fookes, Clinton and Salvado, Olivier (2021). Going Deeper With Brain Morphometry Using Neural Networks. 2021 IEEE 18th International Symposium on Biomedical Imaging (ISBI), Nice, France, 13-16 April 2021. Piscataway, NJ United States: IEEE. doi: 10.1109/isbi48211.2021.9434039

  • Chourak, Hilda, Barateau, Anais, Mylona, Eugenia, Cadin, Capucine, Lafond, Caroline, Greer, Peter, Dowling, Jason, Jean-Claude-Nunes, , Crevoisier, Renaud de and Acosta, Oscar (2021). Voxel-wise analysis for spatial characterisation of pseudo-CT errors in MRI-only radiotherapy planning. IEEE 18th International Symposium on Biomedical Imaging (ISBI), Nice, France, 13-16 April 2021. Piscataway, NJ, United States: IEEE. doi: 10.1109/isbi48211.2021.9433800

  • Nicolson, Aaron, Dowling, Jason and Koopman, Bevan (2021). AEHRC CSIRO at ImageCLEFmed caption 2021. CLEF 2021: Conference and Labs of the Evaluation Forum, Bucharest, Romania, 21-24 September 2021. Aachen, Germany: Rheinisch-Westfaelische Technische Hochschule Aachen.

  • Tonina, Tommaso, Alshehhi, Hamda, Dowling, Jason, Jamanca-Lino, Gustavo, Kennedy, Erin, Kucher, Yelyzaveta, Rijin, K. V. and Norber, Itai (2021). Advanced propulsion as a cornerstone for space exploration and interstellar living. International Astronautical Congress, IAC, Dubai, United Arab Emirates, 25-29 October 2021. Paris, France: International Astronautical Federation, IAF.

  • Otton, J., Finnegan, R. and Dowling, J. (2021). Automated Cardiac Evaluation From Chest CT: Potential Role in COVID-19. 69th CSANZ Annual Scientific Meeting 45th Annual Scientific Meeting of the International Society for Heart Research ANZET 21, Online, 2021. Philadelphia, PA United States: Elsevier. doi: 10.1016/j.hlc.2021.06.186

  • Choi, J., Lee, D., Dowling, J., OConnor, L., Pichler, P. and Greer, P. (2019). Bulk Anatomical Density Maps for Quality Assurance in MRI-Only Prostate Treatment Planning. Annual Meeting of the American-Association-of-Physicists-in-Medicine (AAPM), San Antonio Tx, Jul 14-18, 2019. HOBOKEN: WILEY.

  • Marcello, M., Kennedy, A., Haworth, A., Holloway, L., Dowling, J., Greer, P., Gulliford, S., Dearnaley, D., Sydes, M., Hall, E., Denham, J. and Ebert, M. (2019). External Validation of 3D Spatial Dose-Response Mapping for Toxicity Subsequent to Pelvic Radiotherapy. Annual Meeting of the American-Association-of-Physicists-in-Medicine (AAPM), San Antonio Tx, Jul 14-18, 2019. HOBOKEN: WILEY.

  • Largent, Axel, Nunes, Jean-Claude, Saint-Jalmes, Herve, Baxter, John, Greer, Peter, Dowling, Jason, Crevoisier, Renaud De and Acosta, Oscar (2019). Pseudo-CT generation for mri-only radiotherapy: comparative study between a generative adversarial network, a u-net network, a patch-based, and an atlas based methods. 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019), Venice, Italy, 8-11 April 2019. New York, NY USA: IEEE Computer Society. doi: 10.1109/ISBI.2019.8759278

  • Arabi, Hossein, Dowling, Jason A., Burgos, Ninon, Han, Xiao, Greer, Peter B., Koutsouvelis, Nikolaos and Zaidi, Habib (2018). Comparison of synthetic CT generation algorithms for MRI-only radiation planning in the pelvic region. 2018 IEEE Nuclear Science Symposium and Medical Imaging Conference (NSS/MIC), Sydney, NSW Australia, 10-17 November 2018. Piscataway, NJ United States: Institute of Electrical and Electronics Engineers. doi: 10.1109/NSSMIC.2018.8824321

  • Marcello, M., Kennedy, A., Dowling, J., Haworth, A., Holloway, L., Gulliford, S., Dearnaley, D., Denham, J. and Ebert, M. (2018). Spatial, Anatomically-Localized Mapping of Dose-Toxicity Associations Following Prostate Radiotherapy. 60th Annual Meeting of the American-Association-of-Physicists-in-Medicine, Nashville Tn, Jul 29-Aug 02, 2018. HOBOKEN: WILEY.

  • Roach, D., Ebert, M.A., Jameson, M., Dowling, J.A., Kennedy, A., Greer, P. and Holloway, L. (2018). Inter-observer contouring variation of multiple pelvic structures on CT and MR for prostate cancer. ESTRO 37 - European Society for Radiotherapy & Oncology, Barcelona, Spain, 21-23 April 2018. Shannon, Ireland: Elsevier. doi: 10.1016/s0167-8140(18)31923-6

  • Largent, Axel, Nunes, Jean-Claude, Saint-Jalmes, Hervé, Simon, Antoine, Perichon, Nicolas, Barateau, Anais, Hervé, Chloé, Lafond, Caroline, Greer, Peter B., Dowling, Jason A., De Crevoisier, Renaud and Acosta, Oscar (2017). Pseudo-CT generation by conditional inference random forest for MRI-based radiotherapy treatment planning. European Signal Processing Conference (EUSIPCO), Kos, Greece, 28 August - 2 September 2017. Piscataway, NJ, United States: Institute of Electrical and Electronics Engineers. doi: 10.23919/EUSIPCO.2017.8081166

  • Koivula, L., Wee, L., Dowling, J., Greer, P., Seppälä, T. and Korhonen, J. (2017). Intensity based synthetic CT generation from standard T2-weighted MR images with three MR scanners. ESTRO 36 - European Society for Radiotherapy & Oncology, Vienna, Austria, 5-9 May 2017. Shannon, Ireland: Elsevier. doi: 10.1016/s0167-8140(17)30884-8

  • Bell, L. R., Dowling, J. A., Pogson, E. M., Metcalfe, P. and Holloway, L. (2017). Atlas-based segmentation technique incorporating inter-observer delineation uncertainty for whole breast. Micro-Mini & Nano-Dosimetry & Innovative Technologies in Radiation Therapy (MMND&ITRO2016), Hobart, TAS Australia, 26–28 January 2016. Bristol, United Kingdom: Institute of Physics. doi: 10.1088/1742-6596/777/1/012002

  • Dowling, J. A., Burdett, N., Greer, P. B., Sun, J., Parker, J., Pichler, P., Stanwell, P., Chandra, S., Rivest-Henault, D., Ghose, S., Salvado, O. and Fripp, J. (2014). Automatic atlas based electron density and structure contouring for MRI-based prostate radiation therapy on the cloud. XVII International Conference on the Use of Computers in Radiation Therapy, Melbourne, Australia, 6–9 May 2013. Bristol, United Kingdom: Institute of Physics Publishing. doi: 10.1088/1742-6596/489/1/012048

  • Dowling, Jason, Dang, K., Fox, Chris D., Chandra, S., Gill, Suki, Kron, T., D Pham, D. and Foroudi, F. (2014). Fast cine-magnetic resonance imaging point tracking for prostate cancer radiation therapy planning. ICCR 2013: XVII International Conference on the Use of Computers in Radiation Therapy, Melbourme, VIC, Australia, 6–9 May, 2013. Temple Way, Bristol, United Kingdom: Institute of Physics Publishing. doi: 10.1088/1742-6596/489/1/012027

  • Rivest-Hénault, David, Dowson, Nicholas, Greer, Peter and Dowling, Jason (2014). Inverse-consistent rigid registration of CT and MR for MR-based planning and adaptive prostate radiation therapy. 17th International Conference on the Use of Computers in Radiation Therapy (ICCR), Melbourne Australia, May 06-09, 2013. BRISTOL: Institute of Physics Publishing. doi: 10.1088/1742-6596/489/1/012039

  • Ghose, Soumya, Holloway, Lois, Lim, Karen, Chan, Philip, Veera, Jacqueline, Vinod, Shalini K., Liney, Gary, Greer, Peter B. and Dowling, Jason (2013). A survey of cervix segmentation methods in magnetic resonance images. doi: 10.1007/978-3-642-41083-3_32

  • Ghose, Soumya, Denham, Jim, Ebert, Martin, Kennedy, Angel, Mitra, Jhimli, Rose, Stephen and Dowling, Jason (2013). Multi-atlas and Gaussian Mixture Modeling Based Perirectal Fat Segmentation from CT Images. 5th International Workshop on Abdominal Imaging - Computational and Clinical Applications, Nagoya, Japan, 22 September 2013. New York, NY, United States: Springer. doi: 10.1007/978-3-642-41083-3_22

  • Dimigen, M., Vinod, S., Borok, N., Holloway, L., Dowling, J. and Lim, K. (2012). The use of cervical cancer MRI contouring guidelines in clinical practice. 54th Annual Meeting of the American Society for Radiation Oncology, Boston, MA, United States, 28 - 31 October 2012. Elsevier BV. doi: 10.1016/j.ijrobp.2012.07.1147

  • Whelan, B., Kumar, S., Dowling, J., Lambert, J., Lim, K., Salvado, O., Begg, J., Greer, P., Vinod, S. and Holloway, L. (2012). Requirements for the accuracy of electron density data planning for MRI based cervix cancer treatment planning. 54th Annual Meeting and Exhibition of the American Association of Physicists in Medicine (AAPM), Charlotte, NC, United States, 29July-02 August 2012. College Park, MD, United States: American Association of Physicists in Medicine. doi: 10.1118/1.4735020

  • Chandra, Shekhar, Dowling, Jason, Shen, Kaikai, Pluim, Josien, Greer, Peter, Salvado, Olivier and Fripp, Jurgen (2011). Automatic segmentation of the prostate in 3D magnetic resonance images using case specific deformable models. International Conference on Digital Image Computing: Techniques and Applications, DICTA 2011, Noosa Heads, Qld., Australia, 6-8 December 2011. Piscataway, NJ, United States: I E E E. doi: 10.1109/DICTA.2011.10

  • Dowling, Jason A., Fripp, Jurgen, Chandra, Shekhar, Pluim, Josien P. W., Lambert, Jonathan, Parker, Joel, Denham, James, Greer, Peter B. and Salvado, Olivier (2011). Fast automatic multi-atlas segmentation of the prostate from 3D MR images. 14th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI 2011), Toronto, Canada, 18-22 September 2011. Heidelberg, Germany: Springer. doi: 10.1007/978-3-642-23944-1_2

  • Lambert, J., Dowling, J., Menk, F., Parker, J., Capp, A., Denham, J., Salvado, O. and Greer, P. B. (2011). SU‐D‐110‐05: MR‐Based Dose Calculation for Prostate Radiotherapy Using Atlas‐ Based Auto‐Segmentation. doi: 10.1118/1.3611541

  • Acosta, Oscar, Dowling, Jason, Cazoulat, Guillaume, Simon, Antoine, Salvado, Olivier, de Crevoisier, Renaud and Haigron, Pascal (2010). Atlas based segmentation and mapping of organs at risk from planning CT for the development of voxel-wise predictive models of toxicity in prostate radiotherapy. MICCAI 2010: The 13th International Conference on Medical Image Computing and Computer-Assisted Intervention. F-W8: International Workshop on Prostate Cancer Imaging, Beijing, China, 24 September 2010. Heidelberg, Germany: Springer. doi: 10.1007/978-3-642-15989-3_6

  • Dowling, Jason, Lambert, Jonathan, Parker, Joel, Greer, Peter B., Fripp, Jurgen, Denham, James, Ourselin, Sebastien and Salvado, Olivier (2010). Automatic MRI atlas-based external beam radiation therapy treatment planning for prostate cancer. International Workshop on Prostate Cancer Imaging: Computer-Aided Diagnosis, Prognosis, and Intervention Held in Conjunction with MICCAI 2010, Beijing, China, 22-24 September 2010. Heidelberg, Germany: Springer. doi: 10.1007/978-3-642-15989-3_4

  • Dowling, Jason, Bourgeat, Pierrick, Raffelt, David, Fripp, Jurgen, Greer, Peter B., Patterson, Jacqueline, Denham, James, Gupta, Sanjiv, Tang, Colin, Stanwell, Peter, Ourselin, Sébastien and Salvado, Olivier (2009). Nonrigid correction of interleaving artefacts in pelvic MRI. doi: 10.1117/12.812460

  • Dowling, J. (2009). Current and future prospects for optoelectronic retinal prostheses. Nature Publishing Group. doi: 10.1038/eye.2008.385

  • Maeder, Anthony, Dowling, Jason, Nguyen, Anthony, Brunton, Emma and Nguyen, Phuong (2008). Assuring authenticity of digital mammograms by image watermarking. doi: 10.1007/978-3-540-70538-3_29

  • Dowling, Jason, Planitz, Birgit M., Maeder, Anthony J., Du, Jiang, Pham, Binh, Boyd, Colin, Chen, Shaokang, Bradley, Andrew P. and Crozier, Stuart (2008). A comparison of DCT and DWT block based watermarking on medical image quality. 6th International Workshop on Digital Watermarking, Guangzhou, China, 3-5 December 2007. Heidelberg, Germany: Springer. doi: 10.1007/978-3-540-92238-4_35

  • Dowling, Jason A., Planitz, Birgit M., Maeder, Anthony J., Du, Jiang Du, Pham, Binh, Boyd, Colin, Chen, Shaokang, Bradley, Andrew P. and Crozier, Stuart (2007). Visual quality assessment of watermarked medical images. Medical Imaging 2007: Image Perception, Observer Performance, and Technology Assessment, San Diego, USA, 21-22 February 2007. Bellingham, Wash., U.S.A.: SPIE - International Society for Optical Engineering. doi: 10.1117/12.707571

  • Dowling, Jason, Boles, Wageeh and Maeder, Anthony (2006). A display framework for presenting information from a visual prosthesis. Mechatronics and Machine Vision in Practice.

  • Dowling, J., Boles, W. and Maeder, A. (2006). Mobility assessment using simulated Arti.cial Human Vision. 2005 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'05) - Workshops, San Diego, CA USA, 21-23 September 2005. Piscataway, NJ USA: Institute of Electrical and Electronics Engineers. doi: 10.1109/cvpr.2005.494

  • Dowling, Jason, Boles, Wageeh and Maeder, Anthony (2006). Simulated artificial human vision: The effects of spatial resolution and frame rate on mobility. 4th International Conference on Active Media Technology, Brisbane Australia, Jun 07-09, 2006. AMSTERDAM: IOS PRESS.