The University of Queensland

Lipids and Secretory Vesicle Exocytosis

Akefe, Isaac O., Osborne, Shona L., Matthews, Benjamin, Wallis, Tristan P. and Meunier, Frédéric A. (2023). Lipids and Secretory Vesicle Exocytosis. Advances in Neurobiology. (pp. 357-397) Cham, Switzerland: Springer. doi: 10.1007/978-3-031-34229-5_14

Phospholipase modulation of synaptic membrane landscape: driving force behind memory formation?

Wallis, Tristan P. and Meunier, Frédéric A. (2024). Phospholipase modulation of synaptic membrane landscape: driving force behind memory formation?. Cold Spring Harbor Perspectives in Biology, 16 (4) a041405, 1-16. doi: 10.1101/cshperspect.a041405

Synapsin 2a tetramerisation selectively controls the presynaptic nanoscale organisation of reserve synaptic vesicles

Longfield, Shanley F., Gormal, Rachel S., Feller, Matis, Parutto, Pierre, Reingruber, Jürgen, Wallis, Tristan P., Joensuu, Merja, Augustine, George J., Martínez-Mármol, Ramón, Holcman, David and Meunier, Frédéric A. (2024). Synapsin 2a tetramerisation selectively controls the presynaptic nanoscale organisation of reserve synaptic vesicles. Nature Communications, 15 (1) 2217, 1-18. doi: 10.1038/s41467-024-46256-1

The DDHD2-STXBP1 interaction mediates long-term memory via generation of saturated free fatty acids

Akefe, Isaac O, Saber, Saber H, Matthews, Benjamin, Venkatesh, Bharat G, Gormal, Rachel S, Blackmore, Daniel G, Alexander, Suzy, Sieriecki, Emma, Gambin, Yann, Bertran-Gonzalez, Jesus, Vitale, Nicolas, Humeau, Yann, Gaudin, Arnaud, Ellis, Sevannah A, Michaels, Alysee A, Xue, Mingshan, Cravatt, Benjamin, Joensuu, Merja, Wallis, Tristan P and Meunier, Frédéric A (2024). The DDHD2-STXBP1 interaction mediates long-term memory via generation of saturated free fatty acids. The EMBO Journal, 43 (4), 1-35. doi: 10.1038/s44318-024-00030-7

Interrogation and validation of the interactome of neuronal Munc18-interacting Mint proteins with AlphaFold2

Weeratunga, Saroja, Gormal, Rachel S., Liu, Meihan, Eldershaw, Denaye, Livingstone, Emma K., Malapaka, Anusha, Wallis, Tristan P., Bademosi, Adekunle T., Jiang, Anmin, Healy, Michael D., Meunier, Frederic A. and Collins, Brett M. (2024). Interrogation and validation of the interactome of neuronal Munc18-interacting Mint proteins with AlphaFold2. Journal of Biological Chemistry, 300 (1) 105541, 105541. doi: 10.1016/j.jbc.2023.105541

Tau forms synaptic nano-biomolecular condensates controlling the dynamic clustering of recycling synaptic vesicles

Longfield, Shanley F., Mollazade, Mahdie, Wallis, Tristan P., Gormal, Rachel S., Joensuu, Merja, Wark, Jesse R., van Waardenberg, Ashley J., Small, Christopher, Graham, Mark E., Meunier, Frédéric A. and Martínez-Mármol, Ramón (2023). Tau forms synaptic nano-biomolecular condensates controlling the dynamic clustering of recycling synaptic vesicles. Nature Communications, 14 (1) 7277, 1-20. doi: 10.1038/s41467-023-43130-4

Super-resolved trajectory-derived nanoclustering analysis using spatiotemporal indexing

Wallis, Tristan P., Jiang, Anmin, Young, Kyle, Hou, Huiyi, Kudo, Kye, McCann, Alex J., Durisic, Nela, Joensuu, Merja, Oelz, Dietmar, Nguyen, Hien, Gormal, Rachel S. and Meunier, Frédéric A. (2023). Super-resolved trajectory-derived nanoclustering analysis using spatiotemporal indexing. Nature Communications, 14 (1) 3353, 1-16. doi: 10.1038/s41467-023-38866-y

Tyrosine kinases compete for growth hormone receptor binding and regulate receptor mobility and degradation

Chhabra, Yash, Seiffert, Pernille, Gormal, Rachel S., Vullings, Manon, Lee, Christine Mei Mei, Wallis, Tristan P., Dehkhoda, Farhad, Indrakumar, Sowmya, Jacobsen, Nina L., Lindorff-Larsen, Kresten, Durisic, Nela, Waters, Michael J., Meunier, Frederic A., Kragelund, Birthe B. and Brooks, Andrew J. (2023). Tyrosine kinases compete for growth hormone receptor binding and regulate receptor mobility and degradation. Cell Reports, 42 (5) 112490, 112490. doi: 10.1016/j.celrep.2023.112490

Presynaptic targeting of botulinum neurotoxin type A requires a tripartite PSG‐Syt1 ‐ SV2 plasma membrane nanocluster for synaptic vesicle entry

Joensuu, Merja, Syed, Parnayan, Saber, Saber H., Lanoue, Vanessa, Wallis, Tristan P., Rae, James, Blum, Ailisa, Gormal, Rachel S., Small, Christopher, Sanders, Shanley, Jiang, Anmin, Mahrhold, Stefan, Krez, Nadja, Cousin, Michael A., Cooper‐White, Ruby, Cooper‐White, Justin J., Collins, Brett M., Parton, Robert G., Balistreri, Giuseppe, Rummel, Andreas and Meunier, Frédéric A. (2023). Presynaptic targeting of botulinum neurotoxin type A requires a tripartite PSG‐Syt1 ‐ SV2 plasma membrane nanocluster for synaptic vesicle entry. The EMBO Journal, 42 (13) e112095, e112095. doi: 10.15252/embj.2022112095

Fyn nanoclustering requires switching to an open conformation and is enhanced by FTLD-Tau biomolecular condensates

Martínez-Mármol, Ramón, Small, Christopher, Jiang, Anmin, Palliyaguru, Tishila, Wallis, Tristan P., Gormal, Rachel S., Sibarita, Jean-Baptiste, Götz, Jürgen and Meunier, Frédéric A. (2022). Fyn nanoclustering requires switching to an open conformation and is enhanced by FTLD-Tau biomolecular condensates. Molecular Psychiatry, 28 (2), 946-862. doi: 10.1038/s41380-022-01825-y

Saturated free fatty acids and association with memory formation

Wallis, Tristan P., Venkatesh, Bharat G., Narayana, Vinod K., Kvaskoff, David, Ho, Alan, Sullivan, Robert K., Windels, François, Sah, Pankaj and Meunier, Frédéric A. (2021). Saturated free fatty acids and association with memory formation. Nature Communications, 12 (1) 3443, 3443. doi: 10.1038/s41467-021-23840-3

Modular transient nanoclustering of activated β2-adrenergic receptors revealed by single-molecule tracking of conformation-specific nanobodies

Gormal, Rachel S., Padmanabhan, Pranesh, Kasula, Ravikiran, Bademosi, Adekunle T., Coakley, Sean, Giacomotto, Jean, Blum, Ailisa, Joensuu, Merja, Wallis, Tristan P., Lo, Harriet P., Budnar, Srikanth, Rae, James, Ferguson, Charles, Bastiani, Michele, Thomas, Walter G., Pardon, Els, Steyaert, Jan, Yap, Alpha S., Goodhill, Geoffrey J., Hilliard, Massimo A., Parton, Robert G. and Meunier, Frédéric A. (2020). Modular transient nanoclustering of activated β2-adrenergic receptors revealed by single-molecule tracking of conformation-specific nanobodies. Proceedings of the National Academy of Sciences of the United States of America, 117 (48), 30476-30487. doi: 10.1073/pnas.2007443117

Phospholipases in neuronal function: a role in learning and memory?

Joensuu, Merja, Wallis, Tristan P., Saber, Saber H. and Meunier, Frédéric A. (2019). Phospholipases in neuronal function: a role in learning and memory?. Journal of Neurochemistry, 153 (3) jnc.14918, e14918-333. doi: 10.1111/jnc.14918

VAMP2 Binding to Munc18-1 Domain 3a Controls the Nanoscale Reorganization of the Plasma Membrane and Vesicle Interface During Vesicular Priming

Kasula, Ravikiran, Blum, Ailisa, Salla-Martret, Merce, Chai, Ye Jin, Jiang, Anmin, Wallis, Tristan P., Gormal, Rachel S., Brouillet, Julie Z., Padmanabhan, Pranesh, Weeratunga, Saroja K., Livingstone, Emma K., Mollazade, Mahdie, Joensuu, Merja, Martínez-Mármol, Ramón, Collins, Brett M. and Meunier, Frederic (2019). VAMP2 Binding to Munc18-1 Domain 3a Controls the Nanoscale Reorganization of the Plasma Membrane and Vesicle Interface During Vesicular Priming. SSRN Electronic Journal. doi: 10.2139/ssrn.3362260

Application of whole genome sequencing technology in the investigation of genetic causes of fetal, perinatal, and early infant death

Armes, Jane E., Williams, Mark, Price, Gareth, Wallis, Tristan, Gallagher, Renee, Matsika, Admire, Joy, Christopher, Galea, Melanie, Gardener, Glenn, Leach, Rick, Swagemakers, Sigrid Ma, Tearle, Rick, Stubbs, Andrew, Harraway, James, van der Spek, Peter J. and Venter, Deon J. (2018). Application of whole genome sequencing technology in the investigation of genetic causes of fetal, perinatal, and early infant death. Pediatric and Developmental Pathology, 21 (1), 54-67. doi: 10.1177/1093526617715528

L1 retrotransposon heterogeneity in ovarian tumor cell evolution

Nguyen, Thu H. M., Carreira, Patricia E., Sanchez-Luque, Francisco J., Schauer, Stephanie N., Fagg, Allister C., Richardson, Sandra R., Davies, Claire M., Jesuadian, J. Samuel, Kempen, Marie-Jeanne H. C., Troskie, Robin-Lee, James, Cini, Beaven, Elizabeth A., Wallis, Tristan P., Coward, Jermaine I. G., Chetty, Naven P., Crandon, Alexander J., Venter, Deon J., Armes, Jane E., Perrin, Lewis C., Hooper, John D., Ewing, Adam D., Upton, Kyle R. and Faulkner, Geoffrey J. (2018). L1 retrotransposon heterogeneity in ovarian tumor cell evolution. Cell Reports, 23 (13), 3730-3740. doi: 10.1016/j.celrep.2018.05.090

Myosin VI small insert isoform maintains exocytosis by tethering secretory granules to the cortical actin

Tomatis, Vanesa M., Papadopulos, Andreas, Malintan, Nancy T., Martin, Sally, Wallis, Tristan, Gormal, Rachel S., Kendrick-Jones, John, Buss, Folma and Meunier, Frederic A. (2013). Myosin VI small insert isoform maintains exocytosis by tethering secretory granules to the cortical actin. Journal of Cell Biology, 200 (3), 301-320. doi: 10.1083/jcb.201204092

First outbreak of PVL-positive nonmultiresistant MRSA in a neonatal ICU in Australia: Comparison of MALDI-TOF and SNP-plus-binary gene typing

Schlebusch, S., Price, G. R., Hinds, S., Nourse, C., Schooneveldt, J. M., Tilse, M. H., Liley, H. G., Wallis, T., Bowling, F., Venter, D. and Nimmo, G. R. (2010). First outbreak of PVL-positive nonmultiresistant MRSA in a neonatal ICU in Australia: Comparison of MALDI-TOF and SNP-plus-binary gene typing. European Journal of Clinical Microbiology and Infectious Diseases, 29 (10), 1311-1314. doi: 10.1007/s10096-010-0995-y

Glycosylation of gp116 and gp64 envelope proteins of yellow head virus of Penaeus monodon shrimp

Soowannayan, Chumporn, Cowley, Jeff A., Pearson, Roger D., Wallis, Tristan P., Gorman, Jeffrey J., Michalski, Wojtek P. and Walker, Peter J. (2010). Glycosylation of gp116 and gp64 envelope proteins of yellow head virus of Penaeus monodon shrimp. Journal of General Virology, 91 (10), 2463-2473. doi: 10.1099/vir.0.022111-0

Interaction with factor inhibiting HIF-1 defines an additional mode of cross-coupling between the Notch and hypoxia signaling pathways

Zheng, Xiaofeng, Linke, Sarah, Dias, José M., Zheng, Xiaowei, Gradin, Katarina, Wallis, Tristan P., Hamilton, Brett R., Gustafsson, Maria, Ruas, Jorge L., Wilkins, Sarah, Bilton, Rebecca L., Brismar, Kerstin, Whitelaw, Murray L., Pereira, Teresa, Gorman, Jeffrey J., Ericson, Johan, Peet, Daniel J., Lendahl, Urban and Poellinger, Lorenz (2008). Interaction with factor inhibiting HIF-1 defines an additional mode of cross-coupling between the Notch and hypoxia signaling pathways. Proceedings of the National Academy of Sciences of the United States of America, 105 (9), 3368-3373. doi: 10.1073/pnas.0711591105

The diversity of bioactive proteins in Australian snake venoms

Birrell, G. W., Earl, S. T. H., Wallis, T. P., Masci, P. P., de Jersey, J., Gorman, J. J. and Lavin, M. F. (2007). The diversity of bioactive proteins in Australian snake venoms. Molecular & Cellular Proteomics, 6 (6), 973-986. doi: 10.1074/mcp.M600419-MCP200

Diversity of toxic components from the venom of the evolutionarily distinct black whip snake, Demansia vestigiata

St Pierre, L., Birrell, G. W., Earl, S. T., Wallis, T. P., Gorman, J. J., de Jersey, J., Masci, P. P. and Lavin, M. F. (2007). Diversity of toxic components from the venom of the evolutionarily distinct black whip snake, Demansia vestigiata. Journal of Proteome Research, 6 (8), 3093-3107. doi: 10.1021/pr0701613

Identification of N,N epsilon-dimethyl-lysine in the murine dioxin receptor using MALDI-TOF/TOF- and ESI-LTQ-Orbitrap-FT-MS

Dave, KA, Hamilton, BR, Wallis, TP, Furness, SGB, Whitelaw, ML and Gorman, JJ (2007). Identification of N,N epsilon-dimethyl-lysine in the murine dioxin receptor using MALDI-TOF/TOF- and ESI-LTQ-Orbitrap-FT-MS. International Journal of Mass Spectrometry, 268 (2-3), 168-180. doi: 10.1016/j.ijms.2007.06.001

Identification of secretory granule phosphatidylinositol 4,5-bisphosphateinteracting proteins using an affinity pulldown strategy

Osborne, SL, Wallis, TP, Jimenez, JL, Gorman, JJ and Meunier, FA (2007). Identification of secretory granule phosphatidylinositol 4,5-bisphosphateinteracting proteins using an affinity pulldown strategy. Molecular and Cellular Proteomics, 6 (7), 1158-1169. doi: 10.1074/mcp.M600430-MCP200

Post-translational modification accounts for the presence of varied forms of nerve growth factor in Australian elapid snake venoms

Earl, Stephen, Birrell, Geoffrey, Wallis, Tristan, St Pierre, Liam, Masci, Paul, de Jersey, John, Gorman, Jeffrey and Lavin, Martin (2006). Post-translational modification accounts for the presence of varied forms of nerve growth factor in Australian elapid snake venoms. Proteomics, 6 (24), 6554-6565. doi: 10.1002/pmic.200600263

Molecular diversity in venom from the Australian Brown Snake, Pseudonaja textilis

Birrell, GW, Earl, S, Masci, PP, de Jersey, J, Wallis, TP, Gorman, JJ and Lavin, MF (2006). Molecular diversity in venom from the Australian Brown Snake, Pseudonaja textilis. Molecular and Cellular Proteomics, 5 (2), 379-389. doi: 10.1074/mcp.M500270-MCP200

LH3, a "homologue" of the mastadenoviral E1B 55-kDa protein is a structural protein of atadenoviruses

Gorman, Jeffrey J., Wallis, Tristan P., Whelan, Dean A., Shaw, Jan and Both, Gerald W. (2005). LH3, a "homologue" of the mastadenoviral E1B 55-kDa protein is a structural protein of atadenoviruses. Virology, 342 (1), 159-166. doi: 10.1016/j.virol.2005.07.020

Determination of the disulfide bond arrangement of dengue virus NS1 protein

Wallis, T. P., Huang, C. Y., Nimkar, S. B., Young, P. R. and Gorman, J. J. (2004). Determination of the disulfide bond arrangement of dengue virus NS1 protein. Journal of Biological Chemistry, 279 (20), 20729-20741. doi: 10.1074/jbc.M312907200

Tau - A master regulator of recycling synaptic vesicle clustering at the presynapse

Sanders, Shanley F., Mollazade, Mahdie, Wallis, Tristan P., Gormal, Rachel S., Joensuu, Merja, Wark, Jesse R., Waardenberg, Ashley J., Small, Christopher, Graham, Mark E., Martinez-Marmol, Ramon and Meunier, Frederic A. (2023). Tau - A master regulator of recycling synaptic vesicle clustering at the presynapse. ISN-ESN 2023 Meeting, Porto, Portugal, 8 - 11 August 2023. Chichester, West Sussex, United Kingdom: Wiley-Blackwell Publishing. doi: 10.1111/jnc.15897

Determination of the disulfide bond arrangement of Dengue virus NS1 by staple isotope labeling and mass spectrometry

Wallis, T. P., Huang, C., Nimkar, S., Young, P. R. and Gorman, J. (2003). Determination of the disulfide bond arrangement of Dengue virus NS1 by staple isotope labeling and mass spectrometry. ComBio 2003, Melbourne, 28 Sept - 2 Oct, 2003.

Longield et al_2023_NatComm_Raw

Gormal, Rachel, Meunier, Frederic, Martinez-Marmol, Ramon, Mollazade, Mahdie, Wallis, Tristan, Joensuu, Merja, Sanders, Shanley and Small, Christopher (2023). Longield et al_2023_NatComm_Raw. The University of Queensland. (Dataset) doi: 10.48610/a9c9def

Rat auditory fear conditioning quantified free fatty acid and phospholipid abundance data

Wallis, Tristan P. , Venkatesh, Bharat G. , Narayana, Vinod K. , Kvaskoff, David, Ho, Alan , Sullivan, Robert K. , Windels, François , Sah, Pankaj and Meunier, Frédéric A. (2021). Rat auditory fear conditioning quantified free fatty acid and phospholipid abundance data. The University of Queensland. (Dataset) doi: 10.14264/12793dc